The 2.0 version of rSNPBase

Variant report

Variant rs11689645
Chromosome Location chr2:48608559-48608560
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48595200-48609200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr2:48597800-48609400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:48598600-48609000 Weak transcription Fetal Intestine Small intestine
4 chr2:48598600-48612800 Weak transcription Fetal Stomach stomach
5 chr2:48602600-48608600 Weak transcription Fetal Lung lung
6 chr2:48602600-48608800 Weak transcription Fetal Muscle Leg muscle
7 chr2:48602600-48608800 Weak transcription NH-A brain
8 chr2:48602600-48609200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr2:48602600-48609400 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr2:48602600-48612000 Weak transcription Lung lung
11 chr2:48602600-48612800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr2:48602600-48613400 Weak transcription Left Ventricle heart
13 chr2:48602800-48608600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr2:48602800-48608600 Weak transcription Fetal Kidney kidney
15 chr2:48602800-48609200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr2:48602800-48609200 Weak transcription Stomach Smooth Muscle stomach
17 chr2:48602800-48610000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr2:48602800-48610000 Weak transcription HSMMtube muscle
19 chr2:48602800-48612800 Weak transcription Fetal Muscle Trunk muscle
20 chr2:48603600-48608600 Weak transcription K562 blood
21 chr2:48603600-48608800 Weak transcription Fetal Intestine Large intestine
22 chr2:48603600-48609000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr2:48603800-48610200 Weak transcription Duodenum Mucosa Duodenum
24 chr2:48603800-48614800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr2:48604000-48609000 Weak transcription NHLF lung
26 chr2:48604000-48609200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr2:48604200-48608600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr2:48605000-48609400 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr2:48605000-48609400 Weak transcription HMEC breast
30 chr2:48605200-48609200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr2:48605200-48609400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:48605200-48609600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:48605200-48615000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr2:48605400-48608800 Weak transcription HepG2 liver
35 chr2:48605400-48609000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr2:48605400-48610200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:48605600-48608600 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr2:48605800-48608800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:48605800-48609000 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr2:48605800-48609200 Weak transcription Fetal Thymus thymus
41 chr2:48605800-48610200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:48605800-48615800 Weak transcription Dnd41 blood
43 chr2:48606400-48608600 Weak transcription HSMM muscle
44 chr2:48607000-48608800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr2:48607000-48609400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr2:48607200-48608800 Weak transcription Placenta Placenta
47 chr2:48607200-48609000 Weak transcription NHDF-Ad bronchial
48 chr2:48607200-48610200 Weak transcription Primary B cells from peripheral blood blood
49 chr2:48607200-48611800 Weak transcription Adipose Nuclei Adipose
50 chr2:48607400-48609000 Weak transcription A549 lung

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Last update: Aug 31, 2015