Variant report

Variant rs72818502
Chromosome Location chr2:48556689-48556690
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48543400-48568600 Weak transcription HSMM muscle
2 chr2:48543600-48559400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:48543600-48561000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr2:48543600-48570600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:48544200-48559600 Weak transcription Fetal Kidney kidney
6 chr2:48544400-48558600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:48544400-48570400 Weak transcription NHEK skin
8 chr2:48544400-48570800 Weak transcription HMEC breast
9 chr2:48544600-48558600 Weak transcription Spleen Spleen
10 chr2:48544600-48564400 Weak transcription Fetal Intestine Small intestine
11 chr2:48544800-48559400 Weak transcription Right Atrium heart
12 chr2:48548600-48570600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:48550400-48562200 Enhancers Brain Substantia Nigra brain
14 chr2:48550600-48559400 Enhancers Brain Hippocampus Middle brain
15 chr2:48551600-48558600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr2:48552000-48558800 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr2:48552400-48557800 Weak transcription K562 blood
18 chr2:48552400-48561000 Enhancers Primary T helper cells PMA-I stimulated --
19 chr2:48552400-48561600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:48552400-48566200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr2:48552400-48570600 Weak transcription Aorta Aorta
22 chr2:48553400-48558600 Weak transcription Primary T cells fromperipheralblood blood
23 chr2:48553400-48574400 Weak transcription Lung lung
24 chr2:48553800-48570800 Weak transcription Thymus Thymus
25 chr2:48554400-48558200 Enhancers A549 lung
26 chr2:48554400-48561000 Enhancers Primary neutrophils fromperipheralblood blood
27 chr2:48554400-48570600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr2:48554800-48561600 Weak transcription Psoas Muscle Psoas
29 chr2:48554800-48562000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr2:48555000-48556800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr2:48555000-48557400 Enhancers Primary T cells from cord blood blood
32 chr2:48555000-48560400 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr2:48555000-48560400 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr2:48555000-48561600 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr2:48555000-48562000 Enhancers Primary T helper cells fromperipheralblood blood
36 chr2:48555200-48557000 Enhancers Primary hematopoietic stem cells blood
37 chr2:48555200-48557000 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr2:48555200-48557000 Flanking Active TSS GM12878-XiMat blood
39 chr2:48555200-48557200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:48555200-48557200 Enhancers Adipose Nuclei Adipose
41 chr2:48555200-48557800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:48555200-48558200 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr2:48555200-48558200 Enhancers HepG2 liver
44 chr2:48555200-48559000 Enhancers Brain Cingulate Gyrus brain
45 chr2:48555200-48560800 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr2:48555400-48557000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
47 chr2:48555400-48557800 Enhancers Primary mononuclear cells fromperipheralblood Blood
48 chr2:48555400-48558000 Enhancers HUES64 Cell Line embryonic stem cell
49 chr2:48555400-48558200 Enhancers Liver Liver
50 chr2:48555400-48558400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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