The 2.0 version of rSNPBase

Variant report

Variant rs60825643
Chromosome Location chr2:48623535-48623536
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48619200-48624600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr2:48619400-48624000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:48619400-48624600 Weak transcription Brain Angular Gyrus brain
4 chr2:48619400-48624600 Weak transcription Brain Anterior Caudate brain
5 chr2:48619400-48624600 Weak transcription Brain Cingulate Gyrus brain
6 chr2:48619400-48625400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr2:48619600-48624400 Weak transcription Brain Hippocampus Middle brain
8 chr2:48621200-48623600 Weak transcription Primary B cells from cord blood blood
9 chr2:48622600-48623600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr2:48622600-48623600 Enhancers Primary T helper cells PMA-I stimulated --
11 chr2:48622800-48623600 Enhancers Primary monocytes fromperipheralblood blood
12 chr2:48622800-48623600 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr2:48622800-48623600 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr2:48622800-48623600 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr2:48622800-48623600 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr2:48622800-48623600 Enhancers Duodenum Mucosa Duodenum
17 chr2:48622800-48623600 Enhancers Fetal Thymus thymus
18 chr2:48622800-48623800 Enhancers Primary T cells fromperipheralblood blood
19 chr2:48622800-48623800 Enhancers Primary T helper cells fromperipheralblood blood
20 chr2:48622800-48623800 Enhancers Primary T regulatory cells fromperipheralblood blood
21 chr2:48622800-48623800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr2:48622800-48624000 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr2:48622800-48624200 Enhancers Primary T cells from cord blood blood
24 chr2:48623000-48623600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr2:48623000-48623600 Enhancers Fetal Intestine Large intestine
26 chr2:48623000-48623600 Enhancers Fetal Intestine Small intestine
27 chr2:48623200-48623600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:48623200-48623800 Enhancers Dnd41 blood
29 chr2:48623200-48624000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr2:48623200-48624600 Weak transcription Adipose Nuclei Adipose
31 chr2:48623200-48625600 Enhancers Primary neutrophils fromperipheralblood blood
32 chr2:48623400-48624800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015