Variant report
| Variant | rs72820422 |
|---|---|
| Chromosome Location | chr2:48578799-48578800 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:48569000-48580000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 2 | chr2:48571200-48605200 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr2:48571600-48580000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 4 | chr2:48572200-48597000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 5 | chr2:48572400-48580000 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr2:48573200-48578800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 7 | chr2:48573200-48579400 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 8 | chr2:48573400-48578800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr2:48573400-48579200 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 10 | chr2:48573400-48579200 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr2:48573400-48583200 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr2:48573600-48579000 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 13 | chr2:48573600-48579200 | ZNF genes & repeats | A549 | lung |
| 14 | chr2:48573600-48579400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr2:48573600-48579400 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 16 | chr2:48573600-48604000 | Weak transcription | Ovary | ovary |
| 17 | chr2:48574000-48578800 | Weak transcription | HUVEC | blood vessel |
| 18 | chr2:48574200-48581000 | Genic enhancers | HepG2 | liver |
| 19 | chr2:48574200-48602000 | Weak transcription | Gastric | stomach |
| 20 | chr2:48574600-48602000 | Weak transcription | Small Intestine | intestine |
| 21 | chr2:48574800-48589600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 22 | chr2:48574800-48589600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 23 | chr2:48575800-48579000 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 24 | chr2:48576000-48578800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 25 | chr2:48576200-48578800 | Weak transcription | Esophagus | oesophagus |
| 26 | chr2:48576200-48579400 | Weak transcription | Fetal Heart | heart |
| 27 | chr2:48576200-48579600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 28 | chr2:48576200-48579600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr2:48576200-48579800 | Weak transcription | NH-A | brain |
| 30 | chr2:48576200-48580000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 31 | chr2:48576200-48580400 | Weak transcription | Left Ventricle | heart |
| 32 | chr2:48576200-48583800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 33 | chr2:48576200-48597000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 34 | chr2:48576200-48602000 | Weak transcription | Lung | lung |
| 35 | chr2:48576400-48579800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 36 | chr2:48576400-48579800 | Weak transcription | Hela-S3 | cervix |
| 37 | chr2:48576400-48580200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 38 | chr2:48576400-48583800 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 39 | chr2:48576400-48590000 | Weak transcription | Placenta | Placenta |
| 40 | chr2:48576600-48579200 | Strong transcription | Fetal Muscle Leg | muscle |
| 41 | chr2:48576600-48581400 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 42 | chr2:48576600-48595600 | Weak transcription | Fetal Brain Female | brain |
| 43 | chr2:48576600-48602000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 44 | chr2:48576800-48579200 | Weak transcription | NHDF-Ad | bronchial |
| 45 | chr2:48577000-48578800 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 46 | chr2:48577000-48579800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 47 | chr2:48577000-48580200 | Weak transcription | Fetal Lung | lung |
| 48 | chr2:48577000-48580400 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 49 | chr2:48577000-48580800 | Enhancers | Brain Anterior Caudate | brain |
| 50 | chr2:48577000-48581400 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
