The 2.0 version of rSNPBase

Variant report

Variant rs62137001
Chromosome Location chr2:48568365-48568366
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48543400-48568600 Weak transcription HSMM muscle
2 chr2:48543600-48570600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr2:48544400-48570400 Weak transcription NHEK skin
4 chr2:48544400-48570800 Weak transcription HMEC breast
5 chr2:48548600-48570600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:48552400-48570600 Weak transcription Aorta Aorta
7 chr2:48553400-48574400 Weak transcription Lung lung
8 chr2:48553800-48570800 Weak transcription Thymus Thymus
9 chr2:48554400-48570600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:48555400-48570600 Weak transcription NHLF lung
11 chr2:48556800-48570600 Weak transcription Fetal Thymus thymus
12 chr2:48556800-48571600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr2:48557000-48573200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr2:48557000-48573400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr2:48557200-48568600 Weak transcription HUVEC blood vessel
16 chr2:48557800-48570400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:48558400-48571400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr2:48558800-48568400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr2:48558800-48571200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:48559000-48570600 Weak transcription Left Ventricle heart
21 chr2:48559000-48570600 Weak transcription Spleen Spleen
22 chr2:48559800-48570600 Weak transcription Primary T cells fromperipheralblood blood
23 chr2:48559800-48570600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr2:48559800-48573400 Weak transcription Fetal Kidney kidney
25 chr2:48559800-48573400 Weak transcription Right Atrium heart
26 chr2:48560400-48568600 Weak transcription Primary monocytes fromperipheralblood blood
27 chr2:48560400-48568600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr2:48560600-48573600 Weak transcription Fetal Muscle Trunk muscle
29 chr2:48561000-48571200 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr2:48561600-48571400 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr2:48561800-48571000 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr2:48562000-48573400 Weak transcription Psoas Muscle Psoas
33 chr2:48562000-48573400 Weak transcription K562 blood
34 chr2:48562200-48571000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr2:48564800-48574400 Weak transcription Fetal Stomach stomach
36 chr2:48565200-48570600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:48565200-48570800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr2:48565600-48568600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr2:48565800-48570600 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr2:48565800-48571800 Weak transcription Fetal Intestine Small intestine
41 chr2:48566000-48570600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:48566200-48569200 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr2:48566200-48570200 Enhancers Primary T helper cells PMA-I stimulated --
44 chr2:48566200-48570600 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr2:48566600-48569200 Enhancers Primary T cells from cord blood blood
46 chr2:48566600-48570200 Enhancers Cortex derived primary cultured neurospheres brain
47 chr2:48566600-48573600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:48566800-48568600 Enhancers A549 lung
49 chr2:48566800-48569800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr2:48566800-48570600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015