The 2.0 version of rSNPBase

Variant report

Variant rs62137008
Chromosome Location chr2:48572909-48572910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48553400-48574400 Weak transcription Lung lung
2 chr2:48557000-48573200 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr2:48557000-48573400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr2:48559800-48573400 Weak transcription Fetal Kidney kidney
5 chr2:48559800-48573400 Weak transcription Right Atrium heart
6 chr2:48560600-48573600 Weak transcription Fetal Muscle Trunk muscle
7 chr2:48562000-48573400 Weak transcription Psoas Muscle Psoas
8 chr2:48562000-48573400 Weak transcription K562 blood
9 chr2:48564800-48574400 Weak transcription Fetal Stomach stomach
10 chr2:48566600-48573600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr2:48569000-48573400 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr2:48569000-48573400 Weak transcription Brain Germinal Matrix brain
13 chr2:48569000-48573400 Weak transcription Fetal Lung lung
14 chr2:48569000-48573400 Weak transcription Pancreas Pancrea
15 chr2:48569000-48574400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:48569000-48580000 Weak transcription Rectal Smooth Muscle rectum
17 chr2:48569200-48573400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr2:48570600-48573400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:48570600-48573600 Enhancers Cortex derived primary cultured neurospheres brain
20 chr2:48570800-48573400 Weak transcription Placenta Placenta
21 chr2:48570800-48575600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:48570800-48577400 Weak transcription Placenta Amnion Placenta Amnion
23 chr2:48571000-48573400 Weak transcription H1 Cell Line embryonic stem cell
24 chr2:48571000-48573400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr2:48571000-48573400 Weak transcription Left Ventricle heart
26 chr2:48571000-48574400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr2:48571000-48574400 Weak transcription Small Intestine intestine
28 chr2:48571000-48577000 Weak transcription Spleen Spleen
29 chr2:48571200-48574800 Enhancers Primary neutrophils fromperipheralblood blood
30 chr2:48571200-48605200 Weak transcription Colonic Mucosa Colon
31 chr2:48571400-48573400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr2:48571400-48573400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr2:48571600-48573400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:48571600-48573400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:48571600-48573600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:48571600-48573600 Enhancers Skeletal Muscle Male skeletal muscle
37 chr2:48571600-48580000 Weak transcription Stomach Smooth Muscle stomach
38 chr2:48571800-48573000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:48571800-48573200 Enhancers Primary B cells from cord blood blood
40 chr2:48571800-48573200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr2:48571800-48573200 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr2:48571800-48573200 Weak transcription Colon Smooth Muscle Colon
43 chr2:48571800-48573200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr2:48571800-48573400 Enhancers Primary T helper cells fromperipheralblood blood
45 chr2:48571800-48573400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr2:48571800-48573400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr2:48571800-48573400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr2:48571800-48573400 Enhancers Brain Substantia Nigra brain
49 chr2:48571800-48573400 Weak transcription Duodenum Mucosa Duodenum
50 chr2:48571800-48573400 Weak transcription Rectal Mucosa Donor 29 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015