The 2.0 version of rSNPBase

Variant report

Variant rs62137005
Chromosome Location chr2:48571416-48571417
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48553400-48574400 Weak transcription Lung lung
2 chr2:48556800-48571600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:48557000-48573200 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr2:48557000-48573400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr2:48559800-48573400 Weak transcription Fetal Kidney kidney
6 chr2:48559800-48573400 Weak transcription Right Atrium heart
7 chr2:48560600-48573600 Weak transcription Fetal Muscle Trunk muscle
8 chr2:48562000-48573400 Weak transcription Psoas Muscle Psoas
9 chr2:48562000-48573400 Weak transcription K562 blood
10 chr2:48564800-48574400 Weak transcription Fetal Stomach stomach
11 chr2:48565800-48571800 Weak transcription Fetal Intestine Small intestine
12 chr2:48566600-48573600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr2:48569000-48573400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr2:48569000-48573400 Weak transcription Brain Germinal Matrix brain
15 chr2:48569000-48573400 Weak transcription Fetal Lung lung
16 chr2:48569000-48573400 Weak transcription Pancreas Pancrea
17 chr2:48569000-48574400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr2:48569000-48580000 Weak transcription Rectal Smooth Muscle rectum
19 chr2:48569200-48573400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr2:48570200-48572600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
21 chr2:48570600-48571800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr2:48570600-48572000 Enhancers Primary B cells from peripheral blood blood
23 chr2:48570600-48572000 Enhancers Fetal Thymus thymus
24 chr2:48570600-48572000 Enhancers Sigmoid Colon Sigmoid Colon
25 chr2:48570600-48573400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:48570600-48573600 Enhancers Cortex derived primary cultured neurospheres brain
27 chr2:48570800-48571600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:48570800-48571600 Active TSS Osteobl bone
29 chr2:48570800-48571800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
30 chr2:48570800-48571800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:48570800-48571800 Flanking Active TSS Adipose Nuclei Adipose
32 chr2:48570800-48571800 Flanking Active TSS Brain Anterior Caudate brain
33 chr2:48570800-48571800 Flanking Active TSS Brain Cingulate Gyrus brain
34 chr2:48570800-48571800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr2:48570800-48572000 Flanking Active TSS HUVEC blood vessel
36 chr2:48570800-48572200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:48570800-48572200 Enhancers Fetal Intestine Large intestine
38 chr2:48570800-48572400 Flanking Active TSS HepG2 liver
39 chr2:48570800-48573400 Weak transcription Placenta Placenta
40 chr2:48570800-48575600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:48570800-48577400 Weak transcription Placenta Amnion Placenta Amnion
42 chr2:48571000-48571600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:48571000-48571600 Active TSS Primary T regulatory cells fromperipheralblood blood
44 chr2:48571000-48571600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:48571000-48571600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
46 chr2:48571000-48571600 Active TSS Duodenum Smooth Muscle Duodenum
47 chr2:48571000-48571600 Active TSS A549 lung
48 chr2:48571000-48571600 Active TSS NH-A brain
49 chr2:48571000-48571800 Flanking Active TSS Primary T cells from cord blood blood
50 chr2:48571000-48571800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015