Variant report

Variant rs11718329
Chromosome Location chr3:48309828-48309829
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48283400-48310000 Weak transcription NH-A brain
2 chr3:48283400-48315200 Weak transcription Ovary ovary
3 chr3:48283800-48310400 Weak transcription Rectal Smooth Muscle rectum
4 chr3:48285600-48312400 Weak transcription Psoas Muscle Psoas
5 chr3:48285800-48310200 Weak transcription Fetal Brain Male brain
6 chr3:48285800-48311000 Strong transcription HUES48 Cell Line embryonic stem cell
7 chr3:48288600-48312800 Strong transcription iPS-18 Cell Line embryonic stem cell
8 chr3:48289200-48312000 Strong transcription HUES6 Cell Line embryonic stem cell
9 chr3:48289200-48312600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr3:48293200-48311400 Weak transcription Placenta Placenta
11 chr3:48296000-48311000 Strong transcription H1 Cell Line embryonic stem cell
12 chr3:48296200-48311600 Strong transcription iPS-20b Cell Line embryonic stem cell
13 chr3:48296600-48311000 Strong transcription HUES64 Cell Line embryonic stem cell
14 chr3:48296600-48312000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr3:48297400-48312000 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr3:48297600-48311800 Strong transcription Primary B cells from peripheral blood blood
17 chr3:48297800-48312400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:48299600-48310400 Strong transcription H9 Cell Line embryonic stem cell
19 chr3:48299600-48311800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr3:48299600-48312600 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr3:48300200-48312200 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr3:48300400-48310400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr3:48301600-48310000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:48302800-48312800 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr3:48303000-48317400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr3:48304000-48311600 Weak transcription A549 lung
27 chr3:48304200-48311200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr3:48304800-48314000 Strong transcription iPS-15b Cell Line embryonic stem cell
29 chr3:48305600-48311000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr3:48305600-48318000 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr3:48305800-48310200 Weak transcription Fetal Kidney kidney
32 chr3:48306800-48311000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr3:48306800-48312200 Strong transcription Primary monocytes fromperipheralblood blood
34 chr3:48306800-48312200 Strong transcription Dnd41 blood
35 chr3:48307000-48311400 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr3:48307000-48312400 Strong transcription GM12878-XiMat blood
37 chr3:48307000-48313000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr3:48307400-48311600 Strong transcription Liver Liver
39 chr3:48307400-48311800 Strong transcription K562 blood
40 chr3:48307400-48313600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:48307600-48310800 Strong transcription HSMMtube muscle
42 chr3:48307600-48311200 Strong transcription Aorta Aorta
43 chr3:48307600-48311400 Strong transcription Brain Inferior Temporal Lobe brain
44 chr3:48307600-48312000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:48307600-48312000 Strong transcription Brain Substantia Nigra brain
46 chr3:48307600-48312600 Strong transcription Brain Hippocampus Middle brain
47 chr3:48307600-48312800 Strong transcription Brain Cingulate Gyrus brain
48 chr3:48307600-48312800 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr3:48307600-48313000 Strong transcription Stomach Smooth Muscle stomach
50 chr3:48307600-48314000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell

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