Variant report

Variant	rs9847953
Chromosome Location	chr3:48282695-48282696
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:48226160..48232247-chr3:48279704..48285684,8	K562	blood:
2	chr3:48282380..48283987-chr3:48469620..48473031,3	MCF-7	breast:
3	chr3:48281213..48283691-chr3:48469389..48472428,3	K562	blood:
4	chr3:48282088..48283714-chr3:48470890..48472488,2	MCF-7	breast:
5	chr3:48281295..48284269-chr3:48341390..48344515,3	MCF-7	breast:
6	chr3:48282593..48284828-chr3:48592710..48595263,2	K562	blood:
7	chr3:48281039..48283392-chr3:48513120..48515828,2	K562	blood:
8	chr3:48282372..48284186-chr3:49130575..49132684,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000198218	Chromatin interaction
ENSG00000164050	Chromatin interaction
ENSG00000114268	Chromatin interaction
ENSG00000164045	Chromatin interaction
ENSG00000172113	Chromatin interaction
ENSG00000164054	Chromatin interaction

Extended variants
information (count: 157 )
Associated
traits (count: 39 )

rSNPs within LD-proxies of this variant (count:152)

rs_ID	r²[population]
rs1045482	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs11130162	0.85[EUR][1000 genomes]
rs11130163	0.85[EUR][1000 genomes]
rs11130164	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1134867	0.80[EUR][1000 genomes]
rs11706221	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11706277	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11707606	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11707997	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11709691	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11710257	0.95[CEU][hapmap];0.91[CHB][hapmap];0.92[JPT][hapmap];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11710861	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11713476	0.80[EUR][1000 genomes]
rs11714176	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11714944	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11715776	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11715799	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11715876	0.84[EUR][1000 genomes]
rs11716371	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11716848	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11717716	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11718329	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11718350	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11719365	0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11928691	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12486935	0.92[JPT][hapmap]
rs12486944	0.91[JPT][hapmap]
rs13059037	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13060020	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13061269	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13066044	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13066758	0.90[CEU][hapmap];0.89[CHB][hapmap];0.96[EUR][1000 genomes]
rs13067450	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13068265	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13068288	0.82[EUR][1000 genomes]
rs13069029	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13070210	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13071960	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13072018	0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13079728	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13081169	0.96[CEU][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13081633	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13082158	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13082859	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13084616	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13085251	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13087050	0.83[JPT][hapmap]
rs13087929	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13090538	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13094727	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13095983	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13097450	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13100815	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17647717	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17786132	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2125482	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2361685	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2541	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3197223	0.96[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes]
rs34076262	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34225441	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34523942	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34589064	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34630841	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34728236	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34749846	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34946886	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35190747	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35297395	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35297486	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35411187	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35414021	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35456569	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35778847	0.96[EUR][1000 genomes]
rs35802497	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35944878	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs36020562	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs36064160	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs36075665	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs36092070	0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs36121690	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3729577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731487	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731489	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731497	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731513	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731515	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731534	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731550	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3731555	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3937	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4130522	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4131361	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4131362	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4371540	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4392440	0.96[EUR][1000 genomes]
rs4404473	0.89[EUR][1000 genomes]
rs4420898	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4479622	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4511915	0.91[CEU][hapmap];1.00[CHB][hapmap];0.96[EUR][1000 genomes]
rs4511916	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4541431	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4619808	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4632568	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6442110	0.85[CEU][hapmap];0.85[EUR][1000 genomes]
rs6442111	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6775179	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6782166	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6787500	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs6791930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6793150	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6793223	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6793239	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6794644	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6796343	0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6796490	0.88[CEU][hapmap]
rs6800492	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6801801	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6804986	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6806112	0.85[CEU][hapmap];0.85[EUR][1000 genomes]
rs71323391	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs71323394	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs71323395	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs71323396	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs71323397	0.92[EUR][1000 genomes]
rs745116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7614532	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7621785	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7624450	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7632297	0.95[CEU][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7636461	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7644414	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7645425	0.96[CEU][hapmap];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7647817	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7648720	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7652233	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7653152	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7653336	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9311421	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs936426	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs936427	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9818937	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.82[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9819094	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9825637	0.96[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9830016	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9831531	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9833309	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9834095	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9837228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9850672	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9853804	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9862131	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529989	chr3:47909480-48301481	Genic enhancers Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv1009243	chr3:47935331-48340448	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv536562	chr3:47935331-48340448	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	nsv1002067	chr3:47996472-48326518	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
5	nsv834682	chr3:48138137-48311122	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases

mRNA abundance (count:39)

SNP	Gene	Cis/trans	Tissue	Source
rs9847953	CDC25A	cis	Muscle Skeletal	GTEx
rs9847953	MRPS18AP1	cis	Esophagus Mucosa	GTEx
rs9847953	NME6	cis	Muscle Skeletal	GTEx
rs9847953	MRPS18AP1	cis	Adipose Subcutaneous	GTEx
rs9847953	FCF1P2	cis	Artery Tibial	GTEx
rs9847953	NME6	Cis_1M	lymphoblastoid	RTeQTL
rs9847953	ZNF589	cis	Skin Sun Exposed Lower leg	GTEx
rs9847953	NME6	cis	Lymphoblastoid	GTEx
rs9847953	CDC25A	cis	Artery Tibial	GTEx
rs9847953	CDC25A	cis	Thyroid	GTEx
rs9847953	MRPS18AP1	cis	Nerve Tibial	GTEx
rs9847953	ZNF589	cis	Stomach	GTEx
rs9847953	ZNF589	cis	Temporal Cortex	GTEx
rs9847953	ZNF589	Cis_1M	lymphoblastoid	RTeQTL
rs9847953	NME6	cis	Skin Sun Exposed Lower leg	GTEx
rs9847953	NME6	cis	multi-tissue	Pritchard
rs9847953	MRPS18AP1	cis	Stomach	GTEx
rs9847953	ZNF589	cis	Brain Pons	GTEx
rs9847953	NME6	cis	Artery Tibial	GTEx
rs9847953	ZNF589	cis	Artery Tibial	GTEx
rs9847953	NME6	cis	Esophagus Muscularis	GTEx
rs9847953	MRPS18AP1	cis	Heart Left Ventricle	GTEx
rs9847953	ZNF589	cis	Frontal Cortex	GTEx
rs9847953	ZNF589	cis	Thyroid	GTEx
rs9847953	ZNF589	cis	Esophagus Mucosa	GTEx
rs9847953	MRPS18AP1	cis	Skin Sun Exposed Lower leg	GTEx
rs9847953	NME6	cis	Nerve Tibial	GTEx
rs9847953	MRPS18AP1	cis	lung	GTEx
rs9847953	ZNF589	cis	Esophagus Muscularis	GTEx
rs9847953	CDC25A	cis	Adipose Subcutaneous	GTEx
rs9847953	MRPS18AP1	cis	Muscle Skeletal	GTEx
rs9847953	ZNF589	cis	Nerve Tibial	GTEx
rs9847953	MRPS18AP1	cis	Esophagus Muscularis	GTEx
rs9847953	MRPS18AP1	cis	Thyroid	GTEx
rs9847953	MRPS18AP1	cis	Artery Aorta	GTEx
rs9847953	MRPS18AP1	cis	Artery Tibial	GTEx
rs9847953	ZNF589	cis	Artery Aorta	GTEx
rs9847953	MAP4	Cis_1M	lymphoblastoid	RTeQTL
rs9847953	ZNF589	cis	Cerebellum	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:48282000-48283200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
2	chr3:48282000-48283400	Active TSS	Brain Hippocampus Middle	brain
3	chr3:48282200-48282800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
4	chr3:48282200-48282800	Active TSS	Fetal Muscle Trunk	muscle
5	chr3:48282200-48283000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
6	chr3:48282200-48283400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
7	chr3:48282200-48283400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr3:48282200-48283400	Active TSS	Aorta	Aorta
9	chr3:48282200-48283400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
10	chr3:48282200-48283400	Active TSS	Duodenum Mucosa	Duodenum
11	chr3:48282200-48283400	Active TSS	Fetal Kidney	kidney
12	chr3:48282200-48283400	Active TSS	Fetal Stomach	stomach
13	chr3:48282200-48283400	Active TSS	Left Ventricle	heart
14	chr3:48282200-48283400	Active TSS	Psoas Muscle	Psoas
15	chr3:48282200-48283400	Active TSS	Right Ventricle	heart
16	chr3:48282200-48283400	Active TSS	A549	lung
17	chr3:48282200-48283400	Active TSS	HUVEC	blood vessel
18	chr3:48282200-48283400	Active TSS	NHLF	lung
19	chr3:48282200-48283600	Active TSS	Liver	Liver
20	chr3:48282200-48283600	Active TSS	Fetal Intestine Small	intestine
21	chr3:48282200-48283800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr3:48282200-48283800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr3:48282200-48283800	Active TSS	Rectal Smooth Muscle	rectum
24	chr3:48282400-48282800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr3:48282400-48282800	Flanking Active TSS	Colonic Mucosa	Colon
26	chr3:48282400-48282800	Transcr. at gene 5' and 3'	Right Atrium	heart
27	chr3:48282400-48283000	Active TSS	Primary hematopoietic stem cells	blood
28	chr3:48282400-48283000	Active TSS	Fetal Heart	heart
29	chr3:48282400-48283000	Active TSS	Stomach Mucosa	stomach
30	chr3:48282400-48283200	Active TSS	Fetal Adrenal Gland	Adrenal Gland
31	chr3:48282400-48283200	Active TSS	Fetal Lung	lung
32	chr3:48282400-48283200	Active TSS	Placenta Amnion	Placenta Amnion
33	chr3:48282400-48283200	Active TSS	HSMMtube	muscle
34	chr3:48282400-48283200	Active TSS	Osteobl	bone
35	chr3:48282400-48283400	Active TSS	Breast Myoepithelial Primary Cells	Breast
36	chr3:48282400-48283400	Active TSS	Primary T helper naive cells from peripheral blood	blood
37	chr3:48282400-48283400	Active TSS	Primary T helper cells PMA-I stimulated	--
38	chr3:48282400-48283400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr3:48282400-48283400	Active TSS	Primary T killer memory cells from peripheral blood	blood
40	chr3:48282400-48283400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr3:48282400-48283400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr3:48282400-48283400	Active TSS	Brain Cingulate Gyrus	brain
43	chr3:48282400-48283400	Active TSS	Colon Smooth Muscle	Colon
44	chr3:48282400-48283400	Active TSS	Fetal Intestine Large	intestine
45	chr3:48282400-48283400	Active TSS	Pancreatic Islets	Pancreatic Islet
46	chr3:48282400-48283400	Active TSS	Fetal Muscle Leg	muscle
47	chr3:48282400-48283400	Active TSS	Gastric	stomach
48	chr3:48282400-48283400	Active TSS	Lung	lung
49	chr3:48282400-48283400	Active TSS	Ovary	ovary
50	chr3:48282400-48283400	Active TSS	Pancreas	Pancrea

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