Variant report

Variant rs11719365
Chromosome Location chr3:48280492-48280493
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48274000-48282400 Enhancers Primary monocytes fromperipheralblood blood
2 chr3:48274600-48281200 Weak transcription Brain Germinal Matrix brain
3 chr3:48274600-48281400 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:48274600-48281800 Weak transcription Stomach Smooth Muscle stomach
5 chr3:48274600-48282200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr3:48274600-48282200 Weak transcription Muscle Satellite Cultured Cells --
7 chr3:48274600-48282200 Weak transcription Ovary ovary
8 chr3:48274800-48281200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:48274800-48282000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:48274800-48282000 Weak transcription Brain Hippocampus Middle brain
11 chr3:48274800-48282000 Weak transcription HMEC breast
12 chr3:48275000-48282200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr3:48276000-48281800 Weak transcription GM12878-XiMat blood
14 chr3:48276200-48281400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr3:48278000-48282000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr3:48278000-48282200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:48278200-48281400 Weak transcription Primary B cells from cord blood blood
18 chr3:48278200-48282000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr3:48278200-48282200 Weak transcription Primary hematopoietic stem cells blood
20 chr3:48278200-48282400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr3:48278400-48281000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr3:48278400-48281000 Weak transcription K562 blood
23 chr3:48278400-48281200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr3:48278400-48281800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr3:48278400-48282200 Weak transcription Thymus Thymus
26 chr3:48278400-48282200 Weak transcription Spleen Spleen
27 chr3:48278400-48282400 Weak transcription Esophagus oesophagus
28 chr3:48278600-48281000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr3:48278600-48282000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:48278600-48282000 Weak transcription Fetal Thymus thymus
31 chr3:48278600-48282200 Weak transcription Fetal Lung lung
32 chr3:48278600-48282200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr3:48279000-48281000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr3:48279000-48281400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:48279000-48281400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr3:48279000-48281800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr3:48279000-48281800 Weak transcription HepG2 liver
38 chr3:48279000-48282000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:48279000-48282000 Weak transcription Osteobl bone
40 chr3:48279000-48282200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr3:48279000-48282200 Weak transcription Fetal Intestine Large intestine
42 chr3:48279200-48281000 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr3:48279200-48281200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr3:48279200-48281800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr3:48279200-48282200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr3:48279400-48281000 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr3:48279400-48282000 Weak transcription Adipose Nuclei Adipose
48 chr3:48279400-48282200 Weak transcription NHDF-Ad bronchial
49 chr3:48279800-48282200 Weak transcription Placenta Placenta
50 chr3:48280200-48280600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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