Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1029710	0.91[CEU][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1029711	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11724973	0.95[CEU][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11728826	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12642452	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1990250	0.82[CEU][hapmap]
rs34221791	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4698797	0.82[CEU][hapmap]
rs6533470	0.82[CEU][hapmap]
rs6533471	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6533472	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6533473	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6811142	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6814789	0.83[CEU][hapmap]
rs6827802	0.83[CEU][hapmap]
rs7438763	0.82[CEU][hapmap]
rs764205	0.87[CEU][hapmap]
rs7679303	0.82[CEU][hapmap]
rs9307345	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9917904	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530156	chr4:110721397-110911297	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110800400-110807600	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr4:110800600-110807400	Weak transcription	Psoas Muscle	Psoas

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