Variant report
Variant | rs11768562 |
---|---|
Chromosome Location | chr7:146910236-146910237 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1018074 | 0.89[CEU][hapmap];0.85[EUR][1000 genomes] |
rs10240438 | 0.82[CEU][hapmap] |
rs10255525 | 0.85[CEU][hapmap] |
rs10263495 | 0.82[CEU][hapmap] |
rs10273775 | 0.85[CEU][hapmap];0.86[EUR][1000 genomes] |
rs10278454 | 0.87[CEU][hapmap] |
rs10279761 | 0.85[EUR][1000 genomes] |
rs10500171 | 0.81[CEU][hapmap] |
rs11764751 | 0.96[CEU][hapmap];1.00[CHB][hapmap] |
rs12703883 | 0.84[EUR][1000 genomes] |
rs1390717 | 0.82[CEU][hapmap] |
rs1390718 | 0.81[CEU][hapmap] |
rs1390720 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[YRI][hapmap] |
rs1390722 | 1.00[CEU][hapmap];1.00[CHB][hapmap] |
rs1496539 | 1.00[CHB][hapmap] |
rs1496540 | 0.87[EUR][1000 genomes] |
rs1496541 | 0.89[CEU][hapmap] |
rs1496542 | 0.85[CEU][hapmap] |
rs1496543 | 0.82[CEU][hapmap] |
rs1908765 | 0.81[CEU][hapmap] |
rs2036118 | 1.00[CHB][hapmap] |
rs2132593 | 1.00[CEU][hapmap];1.00[CHB][hapmap] |
rs2888441 | 0.85[EUR][1000 genomes] |
rs4146047 | 0.81[CEU][hapmap] |
rs6954110 | 0.84[EUR][1000 genomes] |
rs6965650 | 0.88[CEU][hapmap] |
rs6968736 | 0.96[CEU][hapmap];1.00[CHB][hapmap] |
rs6974986 | 0.93[EUR][1000 genomes] |
rs7783508 | 0.87[EUR][1000 genomes] |
rs7790730 | 0.82[CEU][hapmap] |
rs7795067 | 0.81[CEU][hapmap];0.81[EUR][1000 genomes] |
rs7799140 | 0.81[CEU][hapmap] |
rs7801686 | 0.82[CEU][hapmap] |
rs7803889 | 0.92[CEU][hapmap];1.00[CHB][hapmap] |
rs903898 | 0.82[CEU][hapmap] |
rs987419 | 0.82[CEU][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv933033 | chr7:146720301-147081560 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv1033898 | chr7:146721499-147081768 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 5 gene(s) | inside rSNPs | diseases |
3 | nsv931005 | chr7:146730472-147381257 | Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 7 gene(s) | inside rSNPs | diseases |
4 | nsv889395 | chr7:146848251-146969389 | Enhancers Active TSS Weak transcription Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | n/a |
5 | nsv889396 | chr7:146854133-147035067 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
6 | nsv5996 | chr7:146905699-146950685 | Enhancers | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |