Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10109835	0.87[JPT][hapmap]
rs10957899	0.81[CHB][hapmap]
rs1450123	0.81[CHB][hapmap]
rs16914726	0.81[CHB][hapmap]
rs16914760	0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs16914778	0.81[CHB][hapmap]
rs2923058	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2957602	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs4242461	0.81[CHB][hapmap]
rs4367560	0.81[CHB][hapmap]
rs4367564	0.81[CHB][hapmap]
rs4376507	0.81[CHB][hapmap]
rs4416833	0.81[CHB][hapmap]
rs4449807	0.81[CHB][hapmap]
rs4524809	0.81[CHB][hapmap]
rs4570174	0.81[CHB][hapmap]
rs4607635	0.81[CHB][hapmap]
rs4873455	0.81[CHB][hapmap]
rs7823310	0.81[CHB][hapmap]
rs9298318	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916392	chr8:50827638-51395140	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv948436	chr8:51115028-51917504	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv1828291	chr8:51225111-51246823	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1832233	chr8:51225111-51256438	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1827302	chr8:51225496-51246823	Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:51236400-51237800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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