Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10109835	0.87[JPT][hapmap]
rs10957899	0.81[CHB][hapmap]
rs11773993	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1450123	0.81[CHB][hapmap]
rs16914726	0.81[CHB][hapmap]
rs16914760	0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs16914778	0.81[CHB][hapmap]
rs2957602	0.94[CEU][hapmap];1.00[EUR][1000 genomes]
rs4242461	0.81[CHB][hapmap]
rs4367560	0.81[CHB][hapmap]
rs4367564	0.81[CHB][hapmap]
rs4376507	0.81[CHB][hapmap]
rs4416833	0.81[CHB][hapmap]
rs4449807	0.81[CHB][hapmap]
rs4524809	0.81[CHB][hapmap]
rs4570174	0.81[CHB][hapmap]
rs4607635	0.81[CHB][hapmap]
rs4873455	0.81[CHB][hapmap]
rs7823310	0.81[CHB][hapmap]
rs9298318	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916392	chr8:50827638-51395140	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv948436	chr8:51115028-51917504	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv1832233	chr8:51225111-51256438	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv831312	chr8:51239772-51422844	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:51243200-51271600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr8:51246800-51247200	Enhancers	Liver	Liver
3	chr8:51247200-51249600	Weak transcription	Liver	Liver

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