The 2.0 version of rSNPBase

Variant report

Variant rs11800656
Chromosome Location chr1:150419879-150419880
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:150380600-150429800 Weak transcription Aorta Aorta
3 chr1:150382000-150432400 Weak transcription Fetal Brain Male brain
4 chr1:150383400-150432200 Weak transcription Right Ventricle heart
5 chr1:150383400-150443200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:150386800-150429800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:150389400-150423400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:150390000-150429600 Weak transcription A549 lung
9 chr1:150393400-150429800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:150393600-150420600 Weak transcription Brain Angular Gyrus brain
11 chr1:150393600-150429800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:150393800-150429800 Weak transcription NHEK skin
13 chr1:150401400-150448200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr1:150405200-150422400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:150408400-150425000 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr1:150409600-150427200 Weak transcription Small Intestine intestine
17 chr1:150409800-150437000 Strong transcription Fetal Thymus thymus
18 chr1:150410000-150429800 Weak transcription H9 Cell Line embryonic stem cell
19 chr1:150410800-150434400 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr1:150411000-150429800 Weak transcription HUVEC blood vessel
21 chr1:150411200-150446400 Strong transcription Dnd41 blood
22 chr1:150411600-150422800 Strong transcription iPS-20b Cell Line embryonic stem cell
23 chr1:150412000-150443000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:150412600-150428200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:150412800-150422200 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr1:150413000-150421000 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr1:150413200-150422800 Strong transcription Hela-S3 cervix
28 chr1:150413400-150422400 Strong transcription Primary T cells fromperipheralblood blood
29 chr1:150413400-150422600 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr1:150413400-150423800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:150413400-150423800 Strong transcription Primary B cells from cord blood blood
32 chr1:150413400-150436000 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr1:150413600-150422800 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr1:150413600-150424200 Strong transcription Liver Liver
35 chr1:150413600-150446200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr1:150413600-150446400 Strong transcription Primary B cells from peripheral blood blood
37 chr1:150413800-150420800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:150413800-150420800 Strong transcription Fetal Lung lung
39 chr1:150413800-150421200 Strong transcription H1 Cell Line embryonic stem cell
40 chr1:150413800-150421400 Strong transcription GM12878-XiMat blood
41 chr1:150413800-150421600 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr1:150413800-150422400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:150413800-150422800 Strong transcription HUES6 Cell Line embryonic stem cell
44 chr1:150413800-150446000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:150414000-150422600 Strong transcription iPS-18 Cell Line embryonic stem cell
46 chr1:150414000-150423800 Strong transcription Primary monocytes fromperipheralblood blood
47 chr1:150414000-150446400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:150414200-150420800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:150414200-150421200 Strong transcription Duodenum Mucosa Duodenum
50 chr1:150414200-150421400 Strong transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015