The 2.0 version of rSNPBase

Variant report

Variant rs58853199
Chromosome Location chr1:150378212-150378213
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:150339800-150390000 Weak transcription Thymus Thymus
4 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:150343800-150378600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:150347000-150392400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:150347200-150380000 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr1:150348000-150390400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:150355600-150382000 Weak transcription Lung lung
10 chr1:150356400-150381400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:150359200-150392000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:150359600-150381200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:150360000-150378800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:150360000-150385000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:150360000-150385200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:150360000-150389600 Weak transcription Dnd41 blood
17 chr1:150360000-150390800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr1:150360800-150387800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:150361800-150378800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:150362200-150378600 Weak transcription Psoas Muscle Psoas
21 chr1:150362200-150382400 Weak transcription Fetal Kidney kidney
22 chr1:150362400-150380800 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:150362400-150381000 Weak transcription Primary B cells from cord blood blood
24 chr1:150362400-150382400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:150362400-150389600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:150362600-150416600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:150363000-150383400 Weak transcription Right Atrium heart
28 chr1:150365000-150379200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:150370000-150407800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr1:150372200-150393200 Weak transcription Stomach Smooth Muscle stomach
31 chr1:150373000-150382200 Weak transcription Gastric stomach
32 chr1:150373000-150382200 Weak transcription Right Ventricle heart
33 chr1:150373000-150382400 Weak transcription Primary B cells from peripheral blood blood
34 chr1:150373200-150378400 Weak transcription Hela-S3 cervix
35 chr1:150373200-150381000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr1:150373200-150382400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:150373200-150382400 Weak transcription GM12878-XiMat blood
38 chr1:150373200-150389400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:150373200-150389800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:150373200-150390800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:150373200-150390800 Weak transcription Fetal Lung lung
42 chr1:150373200-150390800 Weak transcription Fetal Muscle Leg muscle
43 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:150373400-150390600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:150373400-150390600 Weak transcription Fetal Stomach stomach
46 chr1:150373800-150389400 Weak transcription Fetal Thymus thymus
47 chr1:150375200-150378600 Weak transcription Fetal Intestine Small intestine
48 chr1:150375200-150378800 Weak transcription Primary T cells fromperipheralblood blood
49 chr1:150375200-150378800 Weak transcription Left Ventricle heart
50 chr1:150375800-150381200 Enhancers HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015