The 2.0 version of rSNPBase

Variant report

Variant rs11800848
Chromosome Location chr1:93127927-93127928
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93053600-93166200 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:93098400-93205400 Weak transcription NHLF lung
3 chr1:93101600-93163600 Weak transcription Colonic Mucosa Colon
4 chr1:93102000-93157600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:93119600-93130800 Weak transcription Brain Substantia Nigra brain
6 chr1:93120000-93171400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:93121200-93157400 Weak transcription HUVEC blood vessel
8 chr1:93121400-93131600 Weak transcription Osteobl bone
9 chr1:93121400-93159000 Weak transcription NH-A brain
10 chr1:93121400-93162200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:93121600-93130800 Strong transcription Liver Liver
12 chr1:93121600-93166000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:93122000-93145200 Weak transcription HMEC breast
14 chr1:93122000-93154800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr1:93122000-93163200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:93122200-93148200 Weak transcription Fetal Heart heart
17 chr1:93122600-93149200 Weak transcription A549 lung
18 chr1:93122800-93169400 Weak transcription Brain Cingulate Gyrus brain
19 chr1:93123000-93158600 Weak transcription HSMMtube muscle
20 chr1:93123200-93147400 Weak transcription Fetal Muscle Trunk muscle
21 chr1:93123200-93157800 Weak transcription Brain Anterior Caudate brain
22 chr1:93123400-93176200 Weak transcription Psoas Muscle Psoas
23 chr1:93123600-93128200 Weak transcription Left Ventricle heart
24 chr1:93123600-93129200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:93123600-93129200 Weak transcription Fetal Intestine Small intestine
26 chr1:93123600-93129400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:93123600-93131000 Weak transcription Primary B cells from cord blood blood
28 chr1:93123600-93131600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:93123600-93131800 Weak transcription Lung lung
30 chr1:93123600-93131800 Weak transcription Pancreas Pancrea
31 chr1:93123600-93137800 Weak transcription Fetal Lung lung
32 chr1:93123600-93139600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:93123600-93140000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:93123600-93140000 Weak transcription Fetal Stomach stomach
35 chr1:93123600-93140400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:93123600-93140400 Weak transcription Adipose Nuclei Adipose
37 chr1:93123600-93140600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:93123600-93145200 Weak transcription Spleen Spleen
39 chr1:93123600-93145200 Weak transcription NHEK skin
40 chr1:93123600-93147200 Weak transcription Primary B cells from peripheral blood blood
41 chr1:93123600-93147600 Weak transcription Fetal Muscle Leg muscle
42 chr1:93123600-93147800 Weak transcription K562 blood
43 chr1:93123600-93153800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:93123600-93154200 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:93123600-93155400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:93123600-93155400 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:93123600-93155600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:93123600-93158600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:93123600-93160200 Weak transcription Brain Angular Gyrus brain
50 chr1:93123600-93160800 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015