The 2.0 version of rSNPBase

Variant report

Variant rs11805698
Chromosome Location chr1:93203252-93203253
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93098400-93205400 Weak transcription NHLF lung
2 chr1:93123600-93213400 Weak transcription Gastric stomach
3 chr1:93155800-93213400 Weak transcription Lung lung
4 chr1:93186600-93205600 Weak transcription Ovary ovary
5 chr1:93186800-93213400 Weak transcription K562 blood
6 chr1:93188400-93205400 Weak transcription Small Intestine intestine
7 chr1:93188600-93203800 Weak transcription HMEC breast
8 chr1:93189000-93203800 Weak transcription Hela-S3 cervix
9 chr1:93189000-93213400 Weak transcription Fetal Lung lung
10 chr1:93189400-93204200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:93189400-93206000 Weak transcription Brain Anterior Caudate brain
12 chr1:93190000-93221800 Weak transcription Rectal Smooth Muscle rectum
13 chr1:93190200-93220000 Weak transcription Fetal Muscle Leg muscle
14 chr1:93191200-93221600 Weak transcription Fetal Intestine Large intestine
15 chr1:93192400-93221200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:93192400-93226400 Weak transcription Esophagus oesophagus
17 chr1:93193000-93203800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:93193000-93223800 Weak transcription Duodenum Mucosa Duodenum
19 chr1:93193600-93213200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:93194600-93207400 Weak transcription Osteobl bone
21 chr1:93194600-93218000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:93195000-93218000 Weak transcription NHEK skin
23 chr1:93196200-93213400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:93197600-93210800 Weak transcription Placenta Placenta
25 chr1:93198000-93204000 Weak transcription HUVEC blood vessel
26 chr1:93198000-93205800 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:93198200-93205000 Weak transcription Primary B cells from cord blood blood
28 chr1:93198200-93209000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:93199400-93204800 Weak transcription Brain Cingulate Gyrus brain
30 chr1:93199600-93210600 Weak transcription Fetal Stomach stomach
31 chr1:93199600-93211200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:93199600-93211200 Weak transcription Left Ventricle heart
33 chr1:93199600-93212800 Weak transcription Fetal Muscle Trunk muscle
34 chr1:93200200-93207800 Weak transcription Fetal Intestine Small intestine
35 chr1:93200200-93224000 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:93201000-93203400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:93201000-93203600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:93201000-93205000 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:93201000-93205000 Weak transcription Primary B cells from peripheral blood blood
40 chr1:93201000-93205800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:93201000-93208600 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr1:93201000-93208600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:93201000-93210400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:93201000-93210600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:93201000-93211000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:93201000-93211000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:93201000-93211600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:93201000-93213400 Weak transcription Adipose Nuclei Adipose
49 chr1:93201000-93213400 Weak transcription Brain Hippocampus Middle brain
50 chr1:93201000-93218200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015