Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10127495	0.84[ASN][1000 genomes]
rs10157163	0.84[ASN][1000 genomes]
rs10158467	0.84[ASN][1000 genomes]
rs10912554	0.84[ASN][1000 genomes]
rs10912555	0.84[ASN][1000 genomes]
rs10912556	1.00[JPT][hapmap]
rs10912564	0.81[CEU][hapmap];0.90[CHB][hapmap]
rs11811856	0.87[CEU][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs16845543	0.82[JPT][hapmap]
rs16845585	0.82[JPT][hapmap]
rs3861950	0.87[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs4081545	0.86[CEU][hapmap];0.90[CHB][hapmap]
rs4090390	0.90[YRI][hapmap]
rs4090391	0.84[ASN][1000 genomes]
rs4916311	0.84[ASN][1000 genomes]
rs4916312	0.84[ASN][1000 genomes]
rs56028318	0.84[ASN][1000 genomes]
rs61826341	0.84[ASN][1000 genomes]
rs6661173	0.82[JPT][hapmap]
rs6665456	0.84[ASN][1000 genomes]
rs6676785	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs6691738	0.84[ASN][1000 genomes]
rs7514229	0.82[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs7518045	0.82[JPT][hapmap]
rs7521390	0.84[ASN][1000 genomes]
rs7525284	0.86[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7553711	0.84[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173132200-173158800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:173142400-173150800	Weak transcription	HSMMtube	muscle
3	chr1:173143000-173159000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr1:173145400-173152400	Weak transcription	HUVEC	blood vessel
5	chr1:173148600-173152600	Weak transcription	Primary hematopoietic stem cells	blood
6	chr1:173148600-173159200	Weak transcription	Lung	lung
7	chr1:173148800-173152200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr1:173149000-173154400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr1:173149000-173154800	Weak transcription	Dnd41	blood
10	chr1:173149800-173150800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr1:173150200-173159600	Weak transcription	Primary T cells from cord blood	blood
12	chr1:173150600-173151000	Enhancers	Fetal Muscle Leg	muscle
13	chr1:173150600-173157600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr1:173150600-173157800	Strong transcription	HSMM	muscle

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