The 2.0 version of rSNPBase

Variant report

Variant rs11820084
Chromosome Location chr11:75848346-75848347
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75822000-75852200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr11:75825600-75851800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr11:75825800-75852800 Weak transcription Muscle Satellite Cultured Cells --
4 chr11:75826000-75862800 Weak transcription Hela-S3 cervix
5 chr11:75827200-75851800 Weak transcription Gastric stomach
6 chr11:75827400-75851800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr11:75827400-75851800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr11:75827600-75851800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr11:75827600-75851800 Weak transcription Dnd41 blood
10 chr11:75827800-75849400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:75827800-75851400 Weak transcription HepG2 liver
12 chr11:75831400-75851800 Weak transcription Fetal Thymus thymus
13 chr11:75831800-75851600 Weak transcription Spleen Spleen
14 chr11:75832000-75861200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr11:75832400-75852000 Weak transcription Fetal Intestine Large intestine
16 chr11:75832600-75857600 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr11:75832800-75851200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:75832800-75851400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr11:75832800-75851800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:75832800-75859400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr11:75833000-75851600 Weak transcription Lung lung
22 chr11:75833000-75854400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr11:75833000-75862800 Weak transcription K562 blood
24 chr11:75833400-75855000 Weak transcription H1 Cell Line embryonic stem cell
25 chr11:75833400-75872800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr11:75834400-75862800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr11:75834600-75851400 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr11:75834800-75851600 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr11:75834800-75851800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr11:75836200-75851800 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr11:75836400-75849400 Strong transcription Primary B cells from peripheral blood blood
32 chr11:75836600-75848400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr11:75836600-75851400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr11:75836600-75851800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr11:75837600-75849600 Strong transcription Primary B cells from cord blood blood
36 chr11:75838400-75852200 Weak transcription Primary hematopoietic stem cells blood
37 chr11:75839800-75852000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr11:75839800-75858000 Weak transcription Pancreas Pancrea
39 chr11:75841200-75849400 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr11:75841200-75862800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr11:75842600-75851800 Weak transcription Aorta Aorta
42 chr11:75842600-75851800 Weak transcription Fetal Muscle Trunk muscle
43 chr11:75842800-75851800 Weak transcription Placenta Placenta
44 chr11:75843200-75851400 Weak transcription Right Ventricle heart
45 chr11:75843200-75851600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr11:75843200-75851800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr11:75843200-75859400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr11:75843400-75851400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr11:75843400-75851600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr11:75843400-75851800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015