Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:15986414..15988202-chr21:15991109..15993483,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10222179	1.00[EUR][1000 genomes]
rs17003822	1.00[EUR][1000 genomes]
rs17003830	1.00[EUR][1000 genomes]
rs17003835	1.00[EUR][1000 genomes]
rs17003879	1.00[EUR][1000 genomes]
rs55660680	1.00[EUR][1000 genomes]
rs56315338	1.00[EUR][1000 genomes]
rs57281261	1.00[EUR][1000 genomes]
rs57369522	1.00[EUR][1000 genomes]
rs58711927	1.00[EUR][1000 genomes]
rs59115274	1.00[EUR][1000 genomes]
rs59489313	1.00[EUR][1000 genomes]
rs60481541	1.00[EUR][1000 genomes]
rs60792477	1.00[EUR][1000 genomes]
rs6516924	1.00[EUR][1000 genomes]
rs7276028	1.00[EUR][1000 genomes]
rs73894114	1.00[EUR][1000 genomes]
rs73894115	1.00[EUR][1000 genomes]
rs73894119	1.00[EUR][1000 genomes]
rs73894121	1.00[EUR][1000 genomes]
rs73894153	1.00[EUR][1000 genomes]
rs73894154	1.00[EUR][1000 genomes]
rs73894155	1.00[EUR][1000 genomes]
rs73894178	1.00[EUR][1000 genomes]
rs73894180	1.00[EUR][1000 genomes]
rs73894185	1.00[EUR][1000 genomes]
rs8128543	1.00[EUR][1000 genomes]
rs8129135	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8129964	1.00[EUR][1000 genomes]
rs8131281	1.00[EUR][1000 genomes]
rs9305396	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834045	chr21:15900678-16112850	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv834046	chr21:15903792-16077369	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15981000-15989400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr21:15983800-15989800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr21:15984800-15987600	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr21:15984800-15988400	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr21:15984800-15991800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr21:15985000-15991600	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr21:15985200-15988000	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr21:15985600-15989400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr21:15986000-15987400	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr21:15986200-15988000	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr21:15986600-15988000	Enhancers	K562	blood
12	chr21:15986600-15988200	Enhancers	H1 Cell Line	embryonic stem cell
13	chr21:15986600-15988400	Enhancers	Fetal Lung	lung
14	chr21:15987000-15987400	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr21:15987000-15988200	Enhancers	Fetal Stomach	stomach
16	chr21:15987200-15991200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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