Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:15978636..15980280-chr21:15982563..15984789,2	K562	blood:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10222179	1.00[EUR][1000 genomes]
rs11909109	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17003822	1.00[EUR][1000 genomes]
rs17003830	1.00[EUR][1000 genomes]
rs17003835	1.00[EUR][1000 genomes]
rs17003879	1.00[EUR][1000 genomes]
rs55660680	1.00[EUR][1000 genomes]
rs56315338	1.00[EUR][1000 genomes]
rs57281261	1.00[EUR][1000 genomes]
rs57369522	1.00[EUR][1000 genomes]
rs58711927	1.00[EUR][1000 genomes]
rs59115274	1.00[EUR][1000 genomes]
rs59489313	1.00[EUR][1000 genomes]
rs60481541	1.00[EUR][1000 genomes]
rs60792477	1.00[EUR][1000 genomes]
rs6516924	1.00[EUR][1000 genomes]
rs7276028	1.00[EUR][1000 genomes]
rs73894114	1.00[EUR][1000 genomes]
rs73894115	1.00[EUR][1000 genomes]
rs73894119	1.00[EUR][1000 genomes]
rs73894121	1.00[EUR][1000 genomes]
rs73894153	1.00[EUR][1000 genomes]
rs73894154	1.00[EUR][1000 genomes]
rs73894155	1.00[EUR][1000 genomes]
rs73894178	1.00[EUR][1000 genomes]
rs73894180	1.00[EUR][1000 genomes]
rs73894185	1.00[EUR][1000 genomes]
rs8128543	1.00[EUR][1000 genomes]
rs8129964	1.00[EUR][1000 genomes]
rs8131281	1.00[EUR][1000 genomes]
rs9305396	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834045	chr21:15900678-16112850	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv834046	chr21:15903792-16077369	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15975600-15984400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr21:15980800-15986600	Weak transcription	K562	blood
3	chr21:15981000-15984800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr21:15981000-15989400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr21:15982600-15984200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
6	chr21:15982800-15983400	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
7	chr21:15983000-15983600	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell

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