Variant report

Variant rs11950360
Chromosome Location chr5:180248672-180248673
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180238800-180253200 Weak transcription A549 lung
2 chr5:180241600-180251800 Weak transcription Brain Anterior Caudate brain
3 chr5:180243000-180251800 Weak transcription Brain Hippocampus Middle brain
4 chr5:180244400-180251800 Weak transcription Stomach Mucosa stomach
5 chr5:180244400-180252800 Weak transcription NHLF lung
6 chr5:180244600-180256800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:180244600-180256800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr5:180245000-180250400 Weak transcription Thymus Thymus
9 chr5:180245000-180250600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr5:180245000-180256800 Weak transcription Spleen Spleen
11 chr5:180245200-180250400 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr5:180245200-180250600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr5:180245200-180251600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr5:180245400-180250600 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr5:180245400-180252800 Weak transcription Liver Liver
16 chr5:180245600-180250200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:180245600-180250400 Weak transcription Lung lung
18 chr5:180245600-180251800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:180245800-180250400 Weak transcription Fetal Stomach stomach
20 chr5:180245800-180250400 Weak transcription Fetal Thymus thymus
21 chr5:180245800-180252200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr5:180246000-180251000 Weak transcription HSMM muscle
23 chr5:180246000-180251200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr5:180246000-180251800 Weak transcription HepG2 liver
25 chr5:180246200-180250200 Weak transcription Fetal Kidney kidney
26 chr5:180246200-180250400 Weak transcription Psoas Muscle Psoas
27 chr5:180246200-180250600 Weak transcription Stomach Smooth Muscle stomach
28 chr5:180246200-180250600 Weak transcription HSMMtube muscle
29 chr5:180246200-180252600 Weak transcription Colonic Mucosa Colon
30 chr5:180246200-180252600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr5:180247000-180249800 Enhancers Primary monocytes fromperipheralblood blood
32 chr5:180247200-180248800 Enhancers Fetal Intestine Small intestine
33 chr5:180247200-180249000 Enhancers Primary B cells from peripheral blood blood
34 chr5:180247200-180249000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr5:180247400-180248800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr5:180247400-180249000 Enhancers Ovary ovary
37 chr5:180247400-180249200 Enhancers Duodenum Mucosa Duodenum
38 chr5:180247600-180250400 Weak transcription Fetal Muscle Trunk muscle
39 chr5:180247600-180250400 Weak transcription Left Ventricle heart
40 chr5:180247600-180251800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr5:180247600-180252000 Weak transcription Brain Angular Gyrus brain
42 chr5:180247600-180253000 Weak transcription Fetal Intestine Large intestine
43 chr5:180247800-180250400 Weak transcription Esophagus oesophagus
44 chr5:180247800-180250400 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr5:180248000-180248800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr5:180248000-180250400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr5:180248000-180250400 Weak transcription Right Ventricle heart
48 chr5:180248000-180250400 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr5:180248000-180250400 Weak transcription K562 blood
50 chr5:180248000-180251000 Weak transcription Colon Smooth Muscle Colon

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