Variant report

Variant rs17141199
Chromosome Location chr5:180273325-180273326
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
4 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
5 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
6 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
7 chr5:180262400-180276200 Weak transcription Psoas Muscle Psoas
8 chr5:180262600-180276200 Weak transcription HSMMtube muscle
9 chr5:180263200-180274600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr5:180264000-180275600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr5:180264000-180275800 Weak transcription Colonic Mucosa Colon
12 chr5:180264400-180275600 Weak transcription NHLF lung
13 chr5:180264400-180275800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr5:180264600-180273400 Weak transcription Rectal Smooth Muscle rectum
15 chr5:180264600-180274000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:180264600-180274400 Weak transcription Dnd41 blood
17 chr5:180264600-180274600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:180264600-180275600 Weak transcription Colon Smooth Muscle Colon
19 chr5:180264600-180275600 Weak transcription Placenta Amnion Placenta Amnion
20 chr5:180264600-180275800 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr5:180264600-180275800 Weak transcription Spleen Spleen
22 chr5:180264600-180276200 Weak transcription Fetal Brain Male brain
23 chr5:180264800-180274000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr5:180264800-180275600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr5:180264800-180276000 Weak transcription Gastric stomach
26 chr5:180264800-180277200 Weak transcription HepG2 liver
27 chr5:180265000-180274800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr5:180265000-180274800 Weak transcription Duodenum Mucosa Duodenum
29 chr5:180265000-180275200 Weak transcription Right Ventricle heart
30 chr5:180265000-180275800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr5:180265200-180275600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr5:180265200-180276000 Weak transcription Brain Anterior Caudate brain
33 chr5:180265400-180273600 Weak transcription Adipose Nuclei Adipose
34 chr5:180265400-180274200 Weak transcription Primary B cells from cord blood blood
35 chr5:180265400-180275400 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr5:180265400-180275400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr5:180265400-180275600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr5:180265400-180276000 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr5:180265400-180276000 Weak transcription Brain Angular Gyrus brain
40 chr5:180265400-180276000 Weak transcription Left Ventricle heart
41 chr5:180265400-180276600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr5:180265600-180275600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr5:180265600-180275800 Weak transcription Primary T cells fromperipheralblood blood
44 chr5:180265600-180275800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr5:180269400-180274400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr5:180269400-180276000 Weak transcription Primary B cells from peripheral blood blood
47 chr5:180271400-180273800 Strong transcription Thymus Thymus
48 chr5:180271800-180275600 Weak transcription Brain Cingulate Gyrus brain
49 chr5:180272000-180273800 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr5:180272000-180274400 Weak transcription Brain Substantia Nigra brain

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