Variant report

Variant rs59995798
Chromosome Location chr5:180249169-180249170
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180238800-180253200 Weak transcription A549 lung
2 chr5:180241600-180251800 Weak transcription Brain Anterior Caudate brain
3 chr5:180243000-180251800 Weak transcription Brain Hippocampus Middle brain
4 chr5:180244400-180251800 Weak transcription Stomach Mucosa stomach
5 chr5:180244400-180252800 Weak transcription NHLF lung
6 chr5:180244600-180256800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:180244600-180256800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr5:180245000-180250400 Weak transcription Thymus Thymus
9 chr5:180245000-180250600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr5:180245000-180256800 Weak transcription Spleen Spleen
11 chr5:180245200-180250400 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr5:180245200-180250600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr5:180245200-180251600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr5:180245400-180250600 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr5:180245400-180252800 Weak transcription Liver Liver
16 chr5:180245600-180250200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:180245600-180250400 Weak transcription Lung lung
18 chr5:180245600-180251800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:180245800-180250400 Weak transcription Fetal Stomach stomach
20 chr5:180245800-180250400 Weak transcription Fetal Thymus thymus
21 chr5:180245800-180252200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr5:180246000-180251000 Weak transcription HSMM muscle
23 chr5:180246000-180251200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr5:180246000-180251800 Weak transcription HepG2 liver
25 chr5:180246200-180250200 Weak transcription Fetal Kidney kidney
26 chr5:180246200-180250400 Weak transcription Psoas Muscle Psoas
27 chr5:180246200-180250600 Weak transcription Stomach Smooth Muscle stomach
28 chr5:180246200-180250600 Weak transcription HSMMtube muscle
29 chr5:180246200-180252600 Weak transcription Colonic Mucosa Colon
30 chr5:180246200-180252600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr5:180247000-180249800 Enhancers Primary monocytes fromperipheralblood blood
32 chr5:180247400-180249200 Enhancers Duodenum Mucosa Duodenum
33 chr5:180247600-180250400 Weak transcription Fetal Muscle Trunk muscle
34 chr5:180247600-180250400 Weak transcription Left Ventricle heart
35 chr5:180247600-180251800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr5:180247600-180252000 Weak transcription Brain Angular Gyrus brain
37 chr5:180247600-180253000 Weak transcription Fetal Intestine Large intestine
38 chr5:180247800-180250400 Weak transcription Esophagus oesophagus
39 chr5:180247800-180250400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr5:180248000-180250400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:180248000-180250400 Weak transcription Right Ventricle heart
42 chr5:180248000-180250400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr5:180248000-180250400 Weak transcription K562 blood
44 chr5:180248000-180251000 Weak transcription Colon Smooth Muscle Colon
45 chr5:180248000-180251800 Weak transcription Brain Substantia Nigra brain
46 chr5:180248000-180251800 Weak transcription Small Intestine intestine
47 chr5:180248000-180252200 Weak transcription Placenta Placenta
48 chr5:180248000-180256600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr5:180248200-180249200 Enhancers GM12878-XiMat blood
50 chr5:180248200-180250200 Weak transcription Pancreas Pancrea

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