Variant report

Variant rs17141224
Chromosome Location chr5:180284176-180284177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180278200-180286400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr5:180278400-180286600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:180278400-180286800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr5:180278400-180286800 Strong transcription Fetal Thymus thymus
5 chr5:180278400-180287000 Weak transcription Psoas Muscle Psoas
6 chr5:180278400-180287000 Weak transcription Right Ventricle heart
7 chr5:180278400-180287400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:180278400-180287400 Weak transcription Stomach Mucosa stomach
9 chr5:180278600-180284400 Strong transcription Fetal Intestine Large intestine
10 chr5:180278600-180286200 Weak transcription Brain Hippocampus Middle brain
11 chr5:180278600-180286400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:180278600-180286400 Weak transcription Hela-S3 cervix
13 chr5:180278600-180286600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr5:180278600-180287000 Weak transcription Brain Angular Gyrus brain
15 chr5:180278600-180287200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:180278800-180286200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr5:180278800-180286200 Weak transcription Fetal Heart heart
18 chr5:180278800-180286600 Weak transcription Muscle Satellite Cultured Cells --
19 chr5:180278800-180286800 Weak transcription Brain Cingulate Gyrus brain
20 chr5:180278800-180286800 Weak transcription Stomach Smooth Muscle stomach
21 chr5:180278800-180287000 Weak transcription Brain Substantia Nigra brain
22 chr5:180278800-180287400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:180278800-180287400 Weak transcription Small Intestine intestine
24 chr5:180279000-180284400 Strong transcription Primary T cells from cord blood blood
25 chr5:180279000-180285600 Strong transcription Dnd41 blood
26 chr5:180279000-180286200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr5:180279000-180286400 Weak transcription NHDF-Ad bronchial
28 chr5:180279000-180287000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:180279000-180287000 Weak transcription NH-A brain
30 chr5:180279000-180287200 Weak transcription NHLF lung
31 chr5:180279200-180285400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr5:180279800-180286600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr5:180279800-180286800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:180280000-180286200 Strong transcription K562 blood
35 chr5:180280200-180287200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr5:180280400-180284200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr5:180280800-180284200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:180280800-180285800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:180281000-180284200 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr5:180281000-180284200 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr5:180281000-180284200 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr5:180281000-180286600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr5:180281200-180286000 Weak transcription Fetal Brain Male brain
44 chr5:180281200-180286400 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr5:180281400-180284200 Strong transcription Primary B cells from cord blood blood
46 chr5:180281400-180284200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:180281400-180287200 Weak transcription Right Atrium heart
48 chr5:180281600-180286400 Strong transcription Primary T cells fromperipheralblood blood
49 chr5:180281800-180284400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr5:180281800-180284800 Strong transcription Brain Germinal Matrix brain

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