Variant report

Variant rs17141161
Chromosome Location chr5:180266188-180266189
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259000-180272600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:180259400-180271400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr5:180259600-180272400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:180259600-180272600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr5:180260000-180268800 Weak transcription Brain Germinal Matrix brain
8 chr5:180260000-180271400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
11 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
12 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
13 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
14 chr5:180260200-180267400 Weak transcription Fetal Heart heart
15 chr5:180261800-180266400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr5:180261800-180266800 Strong transcription GM12878-XiMat blood
17 chr5:180262400-180272800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr5:180262400-180276200 Weak transcription Psoas Muscle Psoas
19 chr5:180262600-180268800 Weak transcription Fetal Brain Female brain
20 chr5:180262600-180276200 Weak transcription HSMMtube muscle
21 chr5:180263200-180273200 Weak transcription Fetal Intestine Large intestine
22 chr5:180263200-180274600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr5:180263800-180272400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr5:180263800-180272600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr5:180264000-180268600 Weak transcription Fetal Muscle Leg muscle
26 chr5:180264000-180272800 Weak transcription Stomach Smooth Muscle stomach
27 chr5:180264000-180275600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr5:180264000-180275800 Weak transcription Colonic Mucosa Colon
29 chr5:180264200-180273000 Weak transcription Lung lung
30 chr5:180264400-180266600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr5:180264400-180272600 Weak transcription Pancreas Pancrea
32 chr5:180264400-180275600 Weak transcription NHLF lung
33 chr5:180264400-180275800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr5:180264600-180266200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr5:180264600-180267000 Weak transcription Primary hematopoietic stem cells blood
36 chr5:180264600-180267200 Weak transcription Osteobl bone
37 chr5:180264600-180268000 Weak transcription Fetal Lung lung
38 chr5:180264600-180271400 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr5:180264600-180271400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr5:180264600-180271400 Weak transcription Brain Substantia Nigra brain
41 chr5:180264600-180271400 Weak transcription Thymus Thymus
42 chr5:180264600-180272400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr5:180264600-180273000 Weak transcription HSMM muscle
44 chr5:180264600-180273200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr5:180264600-180273200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr5:180264600-180273400 Weak transcription Rectal Smooth Muscle rectum
47 chr5:180264600-180274000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr5:180264600-180274400 Weak transcription Dnd41 blood
49 chr5:180264600-180274600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:180264600-180275600 Weak transcription Colon Smooth Muscle Colon

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