Variant report

Variant rs59799729
Chromosome Location chr5:180254537-180254538
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180244600-180256800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr5:180244600-180256800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr5:180245000-180256800 Weak transcription Spleen Spleen
4 chr5:180248000-180256600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr5:180248200-180256600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr5:180248600-180256000 Weak transcription Primary B cells from cord blood blood
7 chr5:180248600-180256000 Weak transcription Primary hematopoietic stem cells blood
8 chr5:180248800-180256200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr5:180248800-180256800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr5:180249000-180256400 Weak transcription Primary B cells from peripheral blood blood
11 chr5:180249000-180257600 Weak transcription Ovary ovary
12 chr5:180249200-180256600 Weak transcription GM12878-XiMat blood
13 chr5:180250400-180254600 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr5:180250800-180256600 Weak transcription K562 blood
15 chr5:180251400-180256400 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr5:180251600-180254600 Enhancers Pancreas Pancrea
17 chr5:180252000-180256400 Weak transcription Primary T cells fromperipheralblood blood
18 chr5:180252000-180256400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr5:180252000-180256400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr5:180252000-180256400 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr5:180252000-180256600 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr5:180252000-180256600 Weak transcription Rectal Smooth Muscle rectum
23 chr5:180252000-180256800 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr5:180252000-180256800 Weak transcription Thymus Thymus
25 chr5:180252200-180256400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr5:180252200-180257000 Weak transcription Fetal Heart heart
27 chr5:180252600-180255200 Weak transcription Placenta Placenta
28 chr5:180252600-180256600 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr5:180252600-180256800 Weak transcription Small Intestine intestine
30 chr5:180252800-180255200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr5:180252800-180256400 Weak transcription Fetal Stomach stomach
32 chr5:180252800-180256800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:180253000-180256600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr5:180253000-180256600 Weak transcription Fetal Muscle Trunk muscle
35 chr5:180253000-180256800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr5:180253000-180256800 Weak transcription Fetal Kidney kidney
37 chr5:180253000-180256800 Weak transcription Psoas Muscle Psoas
38 chr5:180253200-180256600 Weak transcription Colonic Mucosa Colon
39 chr5:180253200-180256800 Weak transcription Primary T cells from cord blood blood
40 chr5:180253200-180256800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:180253200-180256800 Weak transcription Aorta Aorta
42 chr5:180253200-180256800 Weak transcription Gastric stomach
43 chr5:180253200-180256800 Weak transcription Left Ventricle heart
44 chr5:180253200-180256800 Weak transcription Lung lung
45 chr5:180253200-180256800 Weak transcription Right Ventricle heart
46 chr5:180253200-180256800 Weak transcription Stomach Smooth Muscle stomach
47 chr5:180253200-180257000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr5:180253200-180257000 Weak transcription Esophagus oesophagus
49 chr5:180253400-180256000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr5:180253400-180256400 Weak transcription Brain Hippocampus Middle brain

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