Variant report

Variant	rs11958415
Chromosome Location	chr5:148192219-148192220
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:148187697..148189933-chr5:148190801..148192608,2	K562	blood:

rs_ID	r²[population]
rs10038886	1.00[EUR][1000 genomes]
rs10055423	1.00[EUR][1000 genomes]
rs10072157	1.00[EUR][1000 genomes]
rs10078988	1.00[EUR][1000 genomes]
rs10079055	1.00[EUR][1000 genomes]
rs10477391	1.00[EUR][1000 genomes]
rs10477392	1.00[EUR][1000 genomes]
rs10477393	1.00[EUR][1000 genomes]
rs11949281	1.00[EUR][1000 genomes]
rs11955927	1.00[EUR][1000 genomes]
rs11957071	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11958205	1.00[EUR][1000 genomes]
rs11960708	1.00[EUR][1000 genomes]
rs11960810	1.00[EUR][1000 genomes]
rs13358515	1.00[EUR][1000 genomes]
rs13360245	1.00[EUR][1000 genomes]
rs13360714	1.00[EUR][1000 genomes]
rs13362580	1.00[EUR][1000 genomes]
rs13436102	1.00[EUR][1000 genomes]
rs28385348	1.00[EUR][1000 genomes]
rs35894867	1.00[EUR][1000 genomes]
rs6580574	1.00[EUR][1000 genomes]
rs6580581	1.00[EUR][1000 genomes]
rs6864773	1.00[EUR][1000 genomes]
rs6867121	1.00[EUR][1000 genomes]
rs6884542	1.00[EUR][1000 genomes]
rs6891709	1.00[EUR][1000 genomes]
rs764416	1.00[EUR][1000 genomes]
rs7704797	1.00[EUR][1000 genomes]
rs7710734	1.00[EUR][1000 genomes]
rs7720203	1.00[EUR][1000 genomes]
rs9885585	1.00[EUR][1000 genomes]
rs989875	1.00[EUR][1000 genomes]
rs989876	1.00[EUR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:148186400-148205400	Weak transcription	Aorta	Aorta
2	chr5:148186600-148195000	Weak transcription	Brain Anterior Caudate	brain
3	chr5:148188600-148195000	Weak transcription	Spleen	Spleen
4	chr5:148189000-148195000	Weak transcription	Esophagus	oesophagus
5	chr5:148189000-148204800	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr5:148189000-148205200	Weak transcription	Psoas Muscle	Psoas
7	chr5:148189200-148194400	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr5:148189200-148194600	Weak transcription	Brain Hippocampus Middle	brain
9	chr5:148189200-148196200	Weak transcription	Adipose Nuclei	Adipose
10	chr5:148189400-148193200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr5:148189400-148193400	Enhancers	Primary neutrophils fromperipheralblood	blood
12	chr5:148189600-148192800	Enhancers	Primary B cells from peripheral blood	blood
13	chr5:148189600-148194400	Weak transcription	Fetal Stomach	stomach
14	chr5:148190600-148192800	Enhancers	Primary B cells from cord blood	blood
15	chr5:148190800-148195800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr5:148191200-148195800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr5:148191200-148196200	Weak transcription	Fetal Heart	heart
18	chr5:148191200-148196400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr5:148191400-148196000	Weak transcription	GM12878-XiMat	blood
20	chr5:148191800-148193200	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr5:148191800-148195000	Weak transcription	Fetal Lung	lung
22	chr5:148192000-148196400	Weak transcription	K562	blood
23	chr5:148192200-148194600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr5:148192200-148195800	Weak transcription	Primary hematopoietic stem cells	blood

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