Variant report
Variant | rs11976387 |
---|---|
Chromosome Location | chr7:147178061-147178062 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10242834 | 0.95[YRI][hapmap] |
rs10245926 | 0.90[YRI][hapmap] |
rs10259368 | 0.96[CHB][hapmap];0.95[JPT][hapmap];0.97[ASN][1000 genomes] |
rs1528507 | 0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs1528519 | 0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.96[ASN][1000 genomes] |
rs1528521 | 0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[ASN][1000 genomes] |
rs1528523 | 1.00[CEU][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1528524 | 0.91[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1534553 | 0.93[YRI][hapmap] |
rs16883526 | 0.95[YRI][hapmap] |
rs16883529 | 0.90[YRI][hapmap] |
rs1919191 | 0.90[YRI][hapmap] |
rs2107855 | 0.81[JPT][hapmap] |
rs2107856 | 0.95[YRI][hapmap] |
rs2141388 | 0.95[YRI][hapmap] |
rs2141389 | 0.95[YRI][hapmap] |
rs2222764 | 0.95[YRI][hapmap] |
rs2286125 | 0.95[CHB][hapmap];0.95[JPT][hapmap];0.97[ASN][1000 genomes] |
rs2888489 | 0.95[YRI][hapmap] |
rs2888490 | 0.90[YRI][hapmap] |
rs2888491 | 0.89[YRI][hapmap] |
rs4725719 | 0.88[CEU][hapmap] |
rs4725736 | 0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.98[ASN][1000 genomes] |
rs4725739 | 0.95[YRI][hapmap] |
rs4725740 | 0.95[YRI][hapmap] |
rs4726875 | 0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs4726877 | 0.95[YRI][hapmap] |
rs62481228 | 0.83[EUR][1000 genomes] |
rs6464797 | 0.88[CEU][hapmap] |
rs6464798 | 0.88[CEU][hapmap] |
rs6956932 | 0.95[YRI][hapmap] |
rs6961608 | 0.95[YRI][hapmap] |
rs6964021 | 0.88[CEU][hapmap] |
rs6973129 | 0.95[YRI][hapmap] |
rs6978820 | 0.95[YRI][hapmap] |
rs7778685 | 0.90[YRI][hapmap] |
rs7782445 | 0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[ASN][1000 genomes] |
rs7788729 | 0.88[CEU][hapmap] |
rs7788870 | 0.88[CEU][hapmap] |
rs7788875 | 0.88[CEU][hapmap] |
rs7795712 | 0.90[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs7796028 | 0.96[ASN][1000 genomes] |
rs7800366 | 0.93[AFR][1000 genomes];0.95[ASN][1000 genomes] |
rs7803315 | 1.00[CEU][hapmap] |
rs7803877 | 0.88[CEU][hapmap] |
rs7805259 | 0.88[CEU][hapmap] |
rs899621 | 0.91[CEU][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv931005 | chr7:146730472-147381257 | Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:147176200-147180600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |