Variant report

Variant rs1197687
Chromosome Location chr15:42118651-42118652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42083800-42119400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:42097800-42119600 Weak transcription Psoas Muscle Psoas
3 chr15:42098200-42118800 Strong transcription Fetal Stomach stomach
4 chr15:42100800-42118800 Strong transcription Fetal Adrenal Gland Adrenal Gland
5 chr15:42101800-42119000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr15:42101800-42119600 Weak transcription Hela-S3 cervix
7 chr15:42103600-42118800 Strong transcription Spleen Spleen
8 chr15:42103800-42118800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr15:42103800-42118800 Strong transcription HMEC breast
10 chr15:42104000-42118800 Strong transcription Cortex derived primary cultured neurospheres brain
11 chr15:42104000-42119000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr15:42104000-42119000 Strong transcription Fetal Muscle Leg muscle
13 chr15:42104200-42118800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr15:42104200-42118800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr15:42104200-42119400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr15:42104200-42119600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr15:42104200-42119600 Weak transcription K562 blood
18 chr15:42104400-42119000 Strong transcription Fetal Brain Female brain
19 chr15:42104600-42118800 Strong transcription Primary T cells from cord blood blood
20 chr15:42104800-42118800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr15:42104800-42119000 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr15:42105800-42119000 Strong transcription Fetal Muscle Trunk muscle
23 chr15:42109400-42118800 Strong transcription Lung lung
24 chr15:42109400-42119600 Weak transcription Right Atrium heart
25 chr15:42110000-42118800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr15:42110400-42119600 Weak transcription Small Intestine intestine
27 chr15:42110600-42119400 Weak transcription H9 Cell Line embryonic stem cell
28 chr15:42110800-42119400 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr15:42111000-42119600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr15:42111000-42119600 Weak transcription Fetal Brain Male brain
31 chr15:42111200-42119400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr15:42111200-42119600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr15:42111200-42119600 Weak transcription Fetal Kidney kidney
34 chr15:42111400-42119600 Weak transcription HepG2 liver
35 chr15:42111600-42119400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr15:42112200-42119600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr15:42113000-42119600 Weak transcription Fetal Lung lung
38 chr15:42113400-42118800 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr15:42113400-42118800 Strong transcription Skeletal Muscle Female skeletal muscle
40 chr15:42113400-42119000 Strong transcription Fetal Intestine Large intestine
41 chr15:42113600-42119600 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr15:42113600-42119600 Weak transcription HUVEC blood vessel
43 chr15:42113800-42119400 Weak transcription Primary hematopoietic stem cells blood
44 chr15:42114000-42119600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr15:42114000-42119600 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr15:42114200-42118800 Strong transcription Duodenum Mucosa Duodenum
47 chr15:42114200-42119400 Strong transcription Fetal Intestine Small intestine
48 chr15:42114200-42119600 Weak transcription Stomach Mucosa stomach
49 chr15:42115000-42118800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr15:42115200-42119200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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