Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:37693997..37696365-chr13:37699837..37701727,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10507444	1.00[ASN][1000 genomes]
rs1199997	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1199998	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1200000	1.00[ASN][1000 genomes]
rs1200001	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1200002	1.00[ASN][1000 genomes]
rs1336165	1.00[ASN][1000 genomes]
rs17054770	1.00[ASN][1000 genomes]
rs17054775	1.00[ASN][1000 genomes]
rs17054789	1.00[ASN][1000 genomes]
rs17054790	1.00[ASN][1000 genomes]
rs17054829	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17054838	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17054925	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17054972	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1924421	1.00[ASN][1000 genomes]
rs2181788	1.00[ASN][1000 genomes]
rs4624036	1.00[ASN][1000 genomes]
rs57719094	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59899061	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59901477	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs608385	1.00[ASN][1000 genomes]
rs6563506	1.00[ASN][1000 genomes]
rs73533924	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543820	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7986414	0.92[EUR][1000 genomes]
rs7991565	0.92[EUR][1000 genomes]
rs8001410	1.00[ASN][1000 genomes]
rs9594184	1.00[ASN][1000 genomes]
rs9603124	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37683800-37701400	Weak transcription	Gastric	stomach
2	chr13:37694200-37700800	Weak transcription	Fetal Heart	heart
3	chr13:37695600-37702600	Weak transcription	Right Atrium	heart
4	chr13:37699000-37701000	Weak transcription	Primary neutrophils fromperipheralblood	blood

Quick Search: