The 2.0 version of rSNPBase

Variant report

Variant rs1924421
Chromosome Location chr13:37533356-37533357
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:37517200-37538400 Weak transcription Fetal Brain Male brain
2 chr13:37519600-37561400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr13:37520400-37538000 Weak transcription Colonic Mucosa Colon
4 chr13:37520600-37560800 Weak transcription Small Intestine intestine
5 chr13:37520800-37538000 Weak transcription HepG2 liver
6 chr13:37521000-37536600 Weak transcription Stomach Smooth Muscle stomach
7 chr13:37521200-37538200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr13:37521400-37537800 Weak transcription NHLF lung
9 chr13:37521400-37538000 Weak transcription Placenta Amnion Placenta Amnion
10 chr13:37521400-37538400 Weak transcription Aorta Aorta
11 chr13:37521400-37542800 Weak transcription A549 lung
12 chr13:37521600-37534800 Weak transcription Rectal Smooth Muscle rectum
13 chr13:37521600-37535200 Weak transcription NHEK skin
14 chr13:37521600-37537800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr13:37521600-37538000 Weak transcription H1 Cell Line embryonic stem cell
16 chr13:37521600-37538000 Weak transcription Brain Hippocampus Middle brain
17 chr13:37521600-37538200 Weak transcription HSMMtube muscle
18 chr13:37521800-37539200 Weak transcription K562 blood
19 chr13:37522000-37538000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr13:37522000-37538400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr13:37522600-37541000 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr13:37522600-37548800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr13:37522800-37547000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr13:37523000-37538400 Weak transcription Lung lung
25 chr13:37523000-37545600 Strong transcription Primary T cells fromperipheralblood blood
26 chr13:37523200-37558200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr13:37523400-37538000 Weak transcription Brain Substantia Nigra brain
28 chr13:37523400-37538000 Weak transcription Esophagus oesophagus
29 chr13:37523600-37533800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr13:37523600-37536600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr13:37523800-37536800 Weak transcription Brain Germinal Matrix brain
32 chr13:37523800-37538000 Weak transcription Brain Anterior Caudate brain
33 chr13:37524000-37563800 Weak transcription Psoas Muscle Psoas
34 chr13:37524600-37538400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr13:37524600-37572400 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr13:37524800-37546400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr13:37525000-37560800 Weak transcription Fetal Heart heart
38 chr13:37525600-37535000 Weak transcription NHDF-Ad bronchial
39 chr13:37525600-37544800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr13:37525800-37537400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr13:37526000-37538200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr13:37526200-37538000 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr13:37526600-37535200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr13:37526600-37535400 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr13:37526600-37536000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr13:37526600-37536600 Weak transcription Left Ventricle heart
47 chr13:37526600-37537000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr13:37526600-37538000 Weak transcription Brain Cingulate Gyrus brain
49 chr13:37526600-37556200 Weak transcription Brain Angular Gyrus brain
50 chr13:37526800-37535400 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015