Variant report

Variant	rs12024778
Chromosome Location	chr1:56535381-56535382
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10888954	1.00[ASN][1000 genomes]
rs11206706	0.83[ASN][1000 genomes]
rs11206708	0.83[ASN][1000 genomes]
rs12022559	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12023471	1.00[ASN][1000 genomes]
rs12025328	1.00[ASN][1000 genomes]
rs12026025	0.90[ASN][1000 genomes]
rs12026754	1.00[ASN][1000 genomes]
rs12027471	0.83[ASN][1000 genomes]
rs12027507	0.83[ASN][1000 genomes]
rs12028993	1.00[ASN][1000 genomes]
rs12031780	0.88[ASN][1000 genomes]
rs12031810	1.00[ASN][1000 genomes]
rs12032566	1.00[EUR][1000 genomes]
rs12033449	1.00[ASN][1000 genomes]
rs12035632	1.00[ASN][1000 genomes]
rs12037566	1.00[ASN][1000 genomes]
rs12037900	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12039145	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12039731	0.85[ASN][1000 genomes]
rs12040672	0.83[ASN][1000 genomes]
rs12042311	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12042475	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12044091	1.00[ASN][1000 genomes]
rs12044310	0.90[ASN][1000 genomes]
rs12044313	0.90[ASN][1000 genomes]
rs12045904	0.88[ASN][1000 genomes]
rs12405362	0.83[ASN][1000 genomes]
rs12407240	0.83[ASN][1000 genomes]
rs1412211	1.00[ASN][1000 genomes]
rs1412212	1.00[ASN][1000 genomes]
rs2110030	1.00[ASN][1000 genomes]
rs72910332	1.00[ASN][1000 genomes]
rs72910349	1.00[ASN][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56518200-56540000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:56529200-56540400	Enhancers	NHDF-Ad	bronchial
3	chr1:56532800-56538200	Weak transcription	Placenta	Placenta
4	chr1:56533000-56540600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr1:56533600-56536800	Enhancers	Osteobl	bone
6	chr1:56533800-56535600	Enhancers	HSMM	muscle
7	chr1:56533800-56536200	Enhancers	HUVEC	blood vessel
8	chr1:56533800-56536800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr1:56533800-56536800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr1:56533800-56537400	Enhancers	NHLF	lung
11	chr1:56534000-56535400	Enhancers	HMEC	breast
12	chr1:56534000-56536800	Enhancers	Muscle Satellite Cultured Cells	--
13	chr1:56534000-56536800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr1:56534200-56537800	Weak transcription	Ovary	ovary
15	chr1:56534400-56535400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr1:56534800-56536000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr1:56535000-56536800	Enhancers	Fetal Muscle Leg	muscle
18	chr1:56535200-56537800	Weak transcription	Aorta	Aorta
19	chr1:56535200-56538200	Weak transcription	Hela-S3	cervix
20	chr1:56535200-56538600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr1:56535200-56538600	Weak transcription	Left Ventricle	heart
22	chr1:56535200-56538600	Weak transcription	Psoas Muscle	Psoas
23	chr1:56535200-56539000	Weak transcription	HSMMtube	muscle
24	chr1:56535200-56539400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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