Variant report

Variant	rs12026025
Chromosome Location	chr1:56578431-56578432
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10888954	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11206770	1.00[AMR][1000 genomes]
rs11799937	1.00[CEU][hapmap]
rs12021653	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12023471	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12023808	1.00[AMR][1000 genomes]
rs12024569	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12024778	0.90[ASN][1000 genomes]
rs12025257	1.00[AMR][1000 genomes]
rs12025328	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12025976	1.00[AMR][1000 genomes]
rs12026653	1.00[AMR][1000 genomes]
rs12026754	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12026878	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12027705	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12028993	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12031780	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12031810	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12033449	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12035229	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12035632	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12035686	1.00[AMR][1000 genomes]
rs12035983	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12036549	0.89[ASN][1000 genomes]
rs12037566	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12037900	0.98[ASN][1000 genomes]
rs12038550	0.81[ASN][1000 genomes]
rs12039126	1.00[AMR][1000 genomes]
rs12039490	1.00[AMR][1000 genomes]
rs12039731	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12040943	1.00[AMR][1000 genomes]
rs12041752	1.00[AMR][1000 genomes]
rs12042058	1.00[AMR][1000 genomes]
rs12042311	0.92[ASN][1000 genomes]
rs12044091	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12044098	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12044228	0.89[ASN][1000 genomes]
rs12044310	0.81[ASN][1000 genomes]
rs12044313	0.81[ASN][1000 genomes]
rs12045904	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12047559	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12048642	0.81[ASN][1000 genomes]
rs1412211	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1412212	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2110030	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72910332	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72910349	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56578200-56578600	Enhancers	HepG2	liver
2	chr1:56578400-56580000	Enhancers	Adipose Nuclei	Adipose
3	chr1:56578400-56580200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links