Variant report

Variant	rs10888954
Chromosome Location	chr1:56572199-56572200
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs11206706	0.83[ASN][1000 genomes]
rs11206708	0.83[ASN][1000 genomes]
rs11206770	1.00[AMR][1000 genomes]
rs12021653	1.00[AMR][1000 genomes]
rs12022559	0.83[ASN][1000 genomes]
rs12023471	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12023808	1.00[AMR][1000 genomes]
rs12024569	1.00[AMR][1000 genomes]
rs12024778	1.00[ASN][1000 genomes]
rs12025257	1.00[AMR][1000 genomes]
rs12025328	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12025976	1.00[AMR][1000 genomes]
rs12026025	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12026653	1.00[AMR][1000 genomes]
rs12026754	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12026878	1.00[AMR][1000 genomes]
rs12027471	0.83[ASN][1000 genomes]
rs12027507	0.83[ASN][1000 genomes]
rs12027705	1.00[AMR][1000 genomes]
rs12028993	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12031780	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12031810	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12033449	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12035229	1.00[AMR][1000 genomes]
rs12035632	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12035686	1.00[AMR][1000 genomes]
rs12035983	1.00[AMR][1000 genomes]
rs12037566	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12037900	0.88[ASN][1000 genomes]
rs12039126	1.00[AMR][1000 genomes]
rs12039145	0.83[ASN][1000 genomes]
rs12039490	1.00[AMR][1000 genomes]
rs12039731	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12040672	0.83[ASN][1000 genomes]
rs12040943	1.00[AMR][1000 genomes]
rs12041752	1.00[AMR][1000 genomes]
rs12042058	1.00[AMR][1000 genomes]
rs12042311	0.83[ASN][1000 genomes]
rs12042475	0.83[ASN][1000 genomes]
rs12044091	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12044098	1.00[AMR][1000 genomes]
rs12044310	0.90[ASN][1000 genomes]
rs12044313	0.90[ASN][1000 genomes]
rs12045904	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12047559	1.00[AMR][1000 genomes]
rs12405362	0.83[ASN][1000 genomes]
rs12407240	0.83[ASN][1000 genomes]
rs1412211	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1412212	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2110030	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72910332	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72910349	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56571400-56573400	Flanking Active TSS	Dnd41	blood
2	chr1:56571800-56572200	Flanking Active TSS	Fetal Thymus	thymus
3	chr1:56572000-56572400	Flanking Active TSS	Thymus	Thymus
4	chr1:56572000-56572800	Enhancers	GM12878-XiMat	blood

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