Variant report
Variant | rs12031321 |
---|---|
Chromosome Location | chr1:160494753-160494754 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10494344 | 0.98[ASN][1000 genomes] |
rs11265416 | 0.98[ASN][1000 genomes] |
rs11265423 | 1.00[ASN][1000 genomes] |
rs12021693 | 0.98[ASN][1000 genomes] |
rs12023225 | 0.98[ASN][1000 genomes] |
rs12025833 | 0.98[ASN][1000 genomes] |
rs12025852 | 0.98[ASN][1000 genomes] |
rs12025853 | 0.98[ASN][1000 genomes] |
rs12025909 | 0.98[ASN][1000 genomes] |
rs12026076 | 0.98[ASN][1000 genomes] |
rs12028187 | 0.98[ASN][1000 genomes] |
rs12029117 | 1.00[ASN][1000 genomes] |
rs12030215 | 0.98[ASN][1000 genomes] |
rs12030424 | 0.98[ASN][1000 genomes] |
rs12031547 | 0.98[ASN][1000 genomes] |
rs12031944 | 1.00[ASN][1000 genomes] |
rs12032998 | 1.00[ASN][1000 genomes] |
rs12033791 | 1.00[ASN][1000 genomes] |
rs12034408 | 1.00[ASN][1000 genomes] |
rs12034811 | 0.98[ASN][1000 genomes] |
rs12035059 | 0.98[ASN][1000 genomes] |
rs12036359 | 1.00[ASN][1000 genomes] |
rs12036361 | 1.00[ASN][1000 genomes] |
rs12041528 | 1.00[ASN][1000 genomes] |
rs12043457 | 0.81[ASN][1000 genomes] |
rs12046037 | 0.83[ASN][1000 genomes] |
rs12047475 | 0.98[ASN][1000 genomes] |
rs12048891 | 0.98[ASN][1000 genomes] |
rs12067121 | 0.98[ASN][1000 genomes] |
rs3953020 | 0.98[ASN][1000 genomes] |
rs57700636 | 1.00[ASN][1000 genomes] |
rs59461961 | 0.98[ASN][1000 genomes] |
rs59620977 | 0.98[ASN][1000 genomes] |
rs59621006 | 0.98[ASN][1000 genomes] |
rs59838583 | 1.00[ASN][1000 genomes] |
rs61211901 | 0.98[ASN][1000 genomes] |
rs73014357 | 0.98[ASN][1000 genomes] |
rs73014358 | 0.98[ASN][1000 genomes] |
rs73014361 | 0.98[ASN][1000 genomes] |
rs73014362 | 0.98[ASN][1000 genomes] |
rs73014363 | 0.98[ASN][1000 genomes] |
rs7530395 | 1.00[ASN][1000 genomes] |
rs7541816 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1829614 | chr1:160465291-160595000 | Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 7 gene(s) | inside rSNPs | diseases |
2 | nsv872491 | chr1:160470258-160580549 | Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:160494600-160498800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |