The 2.0 version of rSNPBase

Variant report

Variant rs12031547
Chromosome Location chr1:160489434-160489435
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160486000-160490000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:160486800-160489800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:160488000-160490800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
4 chr1:160488600-160493000 Enhancers Primary hematopoietic stem cells blood
5 chr1:160488800-160489600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:160488800-160491000 Enhancers Dnd41 blood
7 chr1:160488800-160492000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
8 chr1:160489000-160491000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:160489000-160491800 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr1:160489000-160491800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
11 chr1:160489000-160492400 Flanking Active TSS Primary T cells from cord blood blood
12 chr1:160489000-160492600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
13 chr1:160489200-160489600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr1:160489200-160489600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:160489200-160489600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
16 chr1:160489200-160489600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
17 chr1:160489200-160489600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
18 chr1:160489200-160489800 Active TSS GM12878-XiMat blood
19 chr1:160489200-160490000 Enhancers HUES48 Cell Line embryonic stem cell
20 chr1:160489200-160490000 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr1:160489200-160490000 Enhancers Fetal Thymus thymus
22 chr1:160489200-160490200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:160489200-160490600 Enhancers Thymus Thymus
24 chr1:160489200-160490800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:160489200-160490800 Enhancers Fetal Intestine Small intestine
26 chr1:160489200-160491000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:160489200-160491200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
28 chr1:160489200-160491800 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr1:160489200-160492800 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr1:160489200-160493400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
31 chr1:160489400-160489600 Active TSS Primary T regulatory cells fromperipheralblood blood
32 chr1:160489400-160489600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
33 chr1:160489400-160489800 Active TSS Primary T cells fromperipheralblood blood
34 chr1:160489400-160489800 Enhancers A549 lung
35 chr1:160489400-160489800 Enhancers NHEK skin
36 chr1:160489400-160490200 Enhancers H9 Cell Line embryonic stem cell
37 chr1:160489400-160490800 Enhancers Fetal Intestine Large intestine
38 chr1:160489400-160491600 Flanking Active TSS Primary B cells from peripheral blood blood
39 chr1:160489400-160493200 Flanking Active TSS Primary B cells from cord blood blood

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Last update: Aug 31, 2015