The 2.0 version of rSNPBase

Variant report

Variant rs12028187
Chromosome Location chr1:160488942-160488943
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160482200-160489200 Weak transcription Fetal Thymus thymus
2 chr1:160482600-160489200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:160483600-160489000 Enhancers Primary T helper naive cells from peripheral blood blood
4 chr1:160484000-160489200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:160484800-160489000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr1:160484800-160489200 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr1:160484800-160489200 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr1:160485000-160489200 Enhancers Primary T helper cells fromperipheralblood blood
9 chr1:160485600-160489200 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr1:160486000-160490000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:160486200-160489200 Weak transcription Thymus Thymus
12 chr1:160486800-160489800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:160487400-160489200 Enhancers Primary T cells fromperipheralblood blood
14 chr1:160487400-160489400 Genic enhancers Primary B cells from peripheral blood blood
15 chr1:160487800-160489200 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr1:160488000-160489000 Enhancers Primary T regulatory cells fromperipheralblood blood
17 chr1:160488000-160489200 Genic enhancers Primary B cells from cord blood blood
18 chr1:160488000-160490800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
19 chr1:160488400-160489000 Enhancers Primary T cells from cord blood blood
20 chr1:160488600-160489200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:160488600-160493000 Enhancers Primary hematopoietic stem cells blood
22 chr1:160488800-160489200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:160488800-160489200 Flanking Active TSS GM12878-XiMat blood
24 chr1:160488800-160489600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:160488800-160491000 Enhancers Dnd41 blood
26 chr1:160488800-160492000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015