Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16144518..16147487-chr21:16436685..16438487,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AF127577.1-10	chr21:16146622-16147583	NONHSAT081178

Variant related genes	Relation type
ENSG00000180530	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12053660	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12053661	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12481742	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13046559	1.00[ASN][1000 genomes]
rs13050196	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13052551	1.00[CHB][hapmap]
rs17241011	0.87[AMR][1000 genomes]
rs2011512	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs2026844	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2094859	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2822924	0.91[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2822928	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2822929	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2822930	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2822932	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs2822934	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2822950	0.84[CHB][hapmap]
rs57323609	0.87[AMR][1000 genomes]
rs57530452	0.87[AMR][1000 genomes]
rs59113791	0.87[AMR][1000 genomes]
rs61161554	0.87[AMR][1000 genomes]
rs7277958	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9636851	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9976399	1.00[CHB][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9984950	1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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