Variant report

Variant	rs2822930
Chromosome Location	chr21:16159601-16159602
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr21:16143951..16146224-chr21:16159304..16162772,3	K562	blood:
2	chr21:16158722..16160277-chr21:16168209..16170349,2	K562	blood:
3	chr21:16158777..16161281-chr21:16167940..16169709,2	K562	blood:

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs1041402	0.83[CEU][hapmap];1.00[YRI][hapmap];0.83[EUR][1000 genomes]
rs10482860	0.91[CEU][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes]
rs12053660	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12053661	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12053685	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12481742	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13046559	0.97[ASN][1000 genomes]
rs13047105	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs13047199	1.00[ASW][hapmap];0.91[CEU][hapmap];0.92[CHD][hapmap];0.85[GIH][hapmap];0.93[MEX][hapmap];0.85[MKK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13048782	0.82[CEU][hapmap]
rs13050196	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13051727	0.91[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13052243	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs13052551	1.00[CHB][hapmap]
rs13433511	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1569338	0.84[CHD][hapmap]
rs17274666	1.00[YRI][hapmap]
rs17306721	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1964922	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs1964923	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs2011512	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2026844	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2094859	0.97[ASN][1000 genomes]
rs2178898	1.00[YRI][hapmap]
rs2822924	0.91[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.97[ASN][1000 genomes]
rs2822928	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2822929	1.00[CHB][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap]
rs2822932	1.00[CHB][hapmap];0.88[JPT][hapmap]
rs2822934	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs2822935	1.00[ASW][hapmap];1.00[YRI][hapmap]
rs2822942	1.00[ASW][hapmap];1.00[CEU][hapmap];0.84[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2822943	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822944	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822945	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822948	0.91[CEU][hapmap];1.00[YRI][hapmap];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822949	0.91[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822950	1.00[CEU][hapmap];0.83[CHB][hapmap];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2822951	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822954	1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2822956	0.91[CEU][hapmap];0.82[EUR][1000 genomes]
rs28385576	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34031799	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34189799	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34352557	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34424808	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34989434	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35408407	1.00[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs35937945	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62219731	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62219732	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62219736	0.86[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs62219737	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7277958	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs9636851	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9976399	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs9984950	1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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