Variant report

Variant	rs13051727
Chromosome Location	chr21:16184104-16184105
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16182601..16185145-chr21:16186728..16189405,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AF127577.1-9	chr21:16183739-16184509	l_2171_chr21:16183738-16189246_brain

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs1041402	0.91[EUR][1000 genomes]
rs10482860	0.82[CEU][hapmap];0.88[EUR][1000 genomes]
rs13047105	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs13047199	0.82[CEU][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13052243	0.91[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap]
rs13433511	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1569338	0.92[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17241011	0.86[JPT][hapmap];0.91[ASN][1000 genomes]
rs17306721	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1964922	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs1964923	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs2822930	0.91[CEU][hapmap]
rs2822934	0.91[CEU][hapmap]
rs2822936	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2822939	0.92[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2822941	0.92[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2822942	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2822943	0.89[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2822944	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2822945	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2822948	0.82[CEU][hapmap];0.86[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2822949	0.82[CEU][hapmap];0.86[JPT][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2822950	0.90[CEU][hapmap];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2822951	0.91[CEU][hapmap];0.88[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2822954	0.86[JPT][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2822955	0.86[JPT][hapmap];0.89[ASN][1000 genomes]
rs2822956	0.82[CEU][hapmap];0.89[EUR][1000 genomes]
rs28385576	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs34031799	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34189799	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs34352557	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34424808	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs34989434	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35408407	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs35937945	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57323609	0.91[ASN][1000 genomes]
rs57530452	0.99[ASN][1000 genomes]
rs59113791	0.91[ASN][1000 genomes]
rs61161554	0.91[ASN][1000 genomes]
rs62219731	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62219732	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62219736	0.86[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs62219737	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7277621	0.86[JPT][hapmap];0.91[ASN][1000 genomes]
rs7281621	0.86[JPT][hapmap];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs9979051	1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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