Variant report

Variant	rs2822956
Chromosome Location	chr21:16204196-16204197
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1041402	0.91[CEU][hapmap];0.98[EUR][1000 genomes]
rs10482860	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs11909551	0.83[CEU][hapmap]
rs13047105	0.99[EUR][1000 genomes]
rs13047199	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs13048782	0.91[CEU][hapmap]
rs13051727	0.82[CEU][hapmap];0.89[EUR][1000 genomes]
rs13052074	0.83[CEU][hapmap]
rs13052243	0.91[CEU][hapmap]
rs13433511	0.89[EUR][1000 genomes]
rs17306721	0.91[EUR][1000 genomes]
rs1964922	0.98[EUR][1000 genomes]
rs1964923	0.98[EUR][1000 genomes]
rs2011512	0.81[CEU][hapmap]
rs2822930	0.91[CEU][hapmap]
rs2822934	0.91[CEU][hapmap]
rs2822942	0.91[CEU][hapmap];0.92[EUR][1000 genomes]
rs2822943	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2822944	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs2822945	0.91[EUR][1000 genomes]
rs2822948	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs2822949	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs2822950	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs2822951	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs2822954	0.94[EUR][1000 genomes]
rs2822959	0.85[CEU][hapmap]
rs28385576	0.96[EUR][1000 genomes]
rs34031799	0.95[EUR][1000 genomes]
rs34189799	0.96[EUR][1000 genomes]
rs34352557	0.91[EUR][1000 genomes]
rs34424808	0.99[EUR][1000 genomes]
rs34989434	0.95[EUR][1000 genomes]
rs35408407	0.84[EUR][1000 genomes]
rs35937945	0.89[EUR][1000 genomes]
rs62219731	0.89[EUR][1000 genomes]
rs62219732	0.91[EUR][1000 genomes]
rs62219736	0.97[EUR][1000 genomes]
rs62219737	0.92[EUR][1000 genomes]
rs7277621	0.85[CEU][hapmap]
rs7281621	0.85[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869911	chr21:16184645-16210579	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16199200-16204600	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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