The 2.0 version of rSNPBase

Variant report

Variant rs12060919
Chromosome Location chr1:172871498-172871499
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172865200-172872200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172865200-172872200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:172865200-172875200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:172865600-172874600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr1:172865800-172875200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:172865800-172878400 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:172867200-172871600 Weak transcription NHEK skin
8 chr1:172867200-172872200 Weak transcription HMEC breast
9 chr1:172868600-172872000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:172868600-172872200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:172868600-172872600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:172868800-172872400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:172869600-172876800 Enhancers NHLF lung
14 chr1:172870000-172874800 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:172870000-172874800 Weak transcription Dnd41 blood
16 chr1:172870000-172875000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr1:172870000-172875200 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr1:172870200-172874000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:172870200-172875200 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:172870400-172874800 Weak transcription Primary T cells from cord blood blood
21 chr1:172870400-172875000 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr1:172870400-172875200 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:172870600-172872200 Weak transcription HSMMtube muscle
24 chr1:172870800-172874600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:172870800-172874800 Weak transcription Primary B cells from peripheral blood blood
26 chr1:172870800-172875200 Weak transcription Primary B cells from cord blood blood
27 chr1:172870800-172875400 Weak transcription Primary hematopoietic stem cells blood
28 chr1:172870800-172875800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:172871000-172876600 Enhancers HSMM muscle
30 chr1:172871200-172876200 Enhancers HUVEC blood vessel
31 chr1:172871200-172877000 Enhancers NHDF-Ad bronchial
32 chr1:172871200-172877200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:172871400-172873000 Enhancers NH-A brain
34 chr1:172871400-172873600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:172871400-172874400 Enhancers Hela-S3 cervix
36 chr1:172871400-172875200 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:172871400-172876400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:172871400-172876800 Enhancers Osteobl bone
39 chr1:172871400-172877000 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015