Variant report

Variant	rs12087717
Chromosome Location	chr1:220842086-220842087
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11118581	0.91[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11118583	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11118590	1.00[AMR][1000 genomes]
rs12082031	1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12095659	1.00[AMR][1000 genomes]
rs1337570	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs1361092	0.95[YRI][hapmap];0.85[AMR][1000 genomes]
rs1361093	0.96[YRI][hapmap];1.00[AMR][1000 genomes]
rs1538135	0.96[YRI][hapmap];1.00[AMR][1000 genomes]
rs17008205	1.00[AMR][1000 genomes]
rs1856178	0.85[AMR][1000 genomes]
rs1890107	0.95[YRI][hapmap];0.85[AMR][1000 genomes]
rs2095670	0.95[YRI][hapmap];0.85[AMR][1000 genomes]
rs2210977	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs2589579	0.95[YRI][hapmap]
rs2589582	0.96[YRI][hapmap];1.00[AMR][1000 genomes]
rs2589587	0.90[YRI][hapmap];0.85[AMR][1000 genomes]
rs2589591	0.96[YRI][hapmap];1.00[AMR][1000 genomes]
rs2589593	0.91[YRI][hapmap];1.00[AMR][1000 genomes]
rs2786599	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs2786603	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs2786608	0.95[YRI][hapmap];0.85[AMR][1000 genomes]
rs2786611	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs2786615	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs2786618	0.95[YRI][hapmap];0.85[AMR][1000 genomes]
rs2994526	0.94[YRI][hapmap]
rs3010236	1.00[AMR][1000 genomes]
rs4846656	0.95[YRI][hapmap];1.00[AMR][1000 genomes]
rs6702294	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7520040	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7521698	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220829400-220847200	Weak transcription	Right Ventricle	heart
2	chr1:220829600-220845800	Weak transcription	Fetal Heart	heart
3	chr1:220831400-220845800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:220836200-220842800	Weak transcription	Adipose Nuclei	Adipose

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