Variant report

Variant rs12101539
Chromosome Location chr15:45650666-45650667
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45626000-45652000 Weak transcription Brain Substantia Nigra brain
2 chr15:45634600-45651600 Weak transcription Brain Hippocampus Middle brain
3 chr15:45639200-45664200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:45639600-45661800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr15:45640600-45664200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:45640800-45664200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:45641000-45651600 Weak transcription Duodenum Mucosa Duodenum
8 chr15:45641200-45656400 Weak transcription Gastric stomach
9 chr15:45641400-45651000 Weak transcription Fetal Intestine Small intestine
10 chr15:45642600-45655600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr15:45645600-45651400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr15:45646000-45651600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr15:45646200-45652000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr15:45646200-45652400 Weak transcription Colon Smooth Muscle Colon
15 chr15:45646600-45652200 Weak transcription Placenta Placenta
16 chr15:45647600-45651600 Weak transcription Adipose Nuclei Adipose
17 chr15:45647600-45651600 Weak transcription Left Ventricle heart
18 chr15:45647600-45657800 Weak transcription Rectal Smooth Muscle rectum
19 chr15:45647800-45651000 Weak transcription Fetal Muscle Leg muscle
20 chr15:45647800-45651400 Weak transcription Brain Cingulate Gyrus brain
21 chr15:45647800-45652000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr15:45647800-45661600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr15:45648000-45650800 Weak transcription Stomach Smooth Muscle stomach
24 chr15:45648200-45651400 Weak transcription Primary B cells from peripheral blood blood
25 chr15:45648200-45668600 Weak transcription Colonic Mucosa Colon
26 chr15:45648400-45651400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr15:45648400-45651400 Weak transcription Psoas Muscle Psoas
28 chr15:45648400-45651600 Weak transcription Ovary ovary
29 chr15:45648400-45651600 Weak transcription GM12878-XiMat blood
30 chr15:45648400-45654200 Weak transcription Brain Angular Gyrus brain
31 chr15:45648400-45664000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr15:45649200-45652600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr15:45649400-45651800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr15:45649600-45652200 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr15:45649600-45656400 Weak transcription Primary hematopoietic stem cells blood
36 chr15:45649800-45651800 Strong transcription Liver Liver
37 chr15:45650000-45652400 Strong transcription Fetal Intestine Large intestine
38 chr15:45650000-45654000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr15:45650000-45657800 Strong transcription Brain Anterior Caudate brain
40 chr15:45650000-45659000 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr15:45650000-45664200 Weak transcription HSMMtube muscle
42 chr15:45650200-45656400 Weak transcription Brain Germinal Matrix brain
43 chr15:45650200-45657600 Weak transcription Aorta Aorta
44 chr15:45650400-45653200 Strong transcription Fetal Muscle Trunk muscle
45 chr15:45650600-45653000 Strong transcription Pancreas Pancrea
46 chr15:45650600-45654800 Weak transcription Fetal Stomach stomach
47 chr15:45650600-45668000 Weak transcription Right Ventricle heart

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