Variant report

Variant rs1719247
Chromosome Location chr15:45620985-45620986
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45613600-45622000 Weak transcription Pancreas Pancrea
2 chr15:45616000-45624800 Weak transcription Gastric stomach
3 chr15:45616200-45625000 Weak transcription Fetal Intestine Large intestine
4 chr15:45616200-45625600 Weak transcription Fetal Intestine Small intestine
5 chr15:45617200-45621200 Enhancers Cortex derived primary cultured neurospheres brain
6 chr15:45617800-45621600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr15:45619200-45623000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr15:45619400-45621200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:45619400-45622600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr15:45619400-45624800 Weak transcription Brain Anterior Caudate brain
11 chr15:45619600-45621200 Enhancers Brain Cingulate Gyrus brain
12 chr15:45619600-45625000 Weak transcription Brain Angular Gyrus brain
13 chr15:45619800-45623200 Weak transcription Brain Germinal Matrix brain
14 chr15:45620000-45621200 Enhancers Brain Substantia Nigra brain
15 chr15:45620600-45621000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr15:45620600-45621200 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr15:45620600-45621400 Enhancers HepG2 liver
18 chr15:45620800-45621000 Enhancers H1 Cell Line embryonic stem cell
19 chr15:45620800-45621000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr15:45620800-45621000 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr15:45620800-45621200 Enhancers HUES6 Cell Line embryonic stem cell
22 chr15:45620800-45621200 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr15:45620800-45625600 Weak transcription Brain Hippocampus Middle brain

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