Variant report

Variant rs66528868
Chromosome Location chr15:45668547-45668548
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45648200-45668600 Weak transcription Colonic Mucosa Colon
2 chr15:45652600-45668800 Weak transcription Spleen Spleen
3 chr15:45652800-45669800 Weak transcription Lung lung
4 chr15:45654200-45668800 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr15:45658400-45669600 Weak transcription Aorta Aorta
6 chr15:45658600-45668600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr15:45660800-45668600 Weak transcription Left Ventricle heart
8 chr15:45661000-45668600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr15:45664400-45669600 Weak transcription Small Intestine intestine
10 chr15:45664400-45669800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr15:45666400-45668800 Weak transcription Stomach Mucosa stomach
12 chr15:45666600-45669600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr15:45666800-45668600 Genic enhancers Fetal Intestine Large intestine
14 chr15:45666800-45668600 Strong transcription Fetal Muscle Trunk muscle
15 chr15:45667600-45668800 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
16 chr15:45667600-45669000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr15:45667600-45669000 Transcr. at gene 5' and 3' Liver Liver
18 chr15:45667600-45669000 Transcr. at gene 5' and 3' Brain Anterior Caudate brain
19 chr15:45667600-45669000 Transcr. at gene 5' and 3' Ovary ovary
20 chr15:45667800-45669000 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
21 chr15:45667800-45669000 Transcr. at gene 5' and 3' Pancreas Pancrea
22 chr15:45667800-45669600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr15:45667800-45669600 Enhancers HSMM muscle
24 chr15:45668000-45668600 Strong transcription Esophagus oesophagus
25 chr15:45668000-45668600 Enhancers Fetal Brain Female brain
26 chr15:45668000-45668600 Enhancers Rectal Mucosa Donor 31 rectum
27 chr15:45668000-45668800 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
28 chr15:45668000-45668800 Enhancers Right Ventricle heart
29 chr15:45668000-45668800 Genic enhancers Skeletal Muscle Female skeletal muscle
30 chr15:45668000-45669000 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
31 chr15:45668000-45669200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr15:45668000-45669200 Flanking Active TSS Brain Inferior Temporal Lobe brain
33 chr15:45668000-45669200 Transcr. at gene 5' and 3' Brain Substantia Nigra brain
34 chr15:45668000-45669200 Flanking Active TSS Rectal Smooth Muscle rectum
35 chr15:45668000-45669600 Enhancers Fetal Brain Male brain
36 chr15:45668200-45668600 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
37 chr15:45668200-45668600 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
38 chr15:45668200-45668600 Weak transcription Gastric stomach
39 chr15:45668200-45668600 Enhancers Rectal Mucosa Donor 29 rectum
40 chr15:45668200-45668800 Transcr. at gene 5' and 3' Brain Angular Gyrus brain
41 chr15:45668200-45668800 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
42 chr15:45668200-45668800 Transcr. at gene 5' and 3' Brain Dorsolateral Prefrontal Cortex brain
43 chr15:45668200-45669000 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
44 chr15:45668200-45669200 Enhancers Cortex derived primary cultured neurospheres brain
45 chr15:45668200-45669400 Enhancers HepG2 liver
46 chr15:45668200-45669600 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr15:45668200-45669600 Bivalent Enhancer Fetal Heart heart
48 chr15:45668200-45669800 Enhancers HSMMtube muscle
49 chr15:45668400-45668600 Genic enhancers Skeletal Muscle Male skeletal muscle
50 chr15:45668400-45668600 Strong transcription GM12878-XiMat blood

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