The 2.0 version of rSNPBase

Variant report

Variant rs68087211
Chromosome Location chr15:45642587-45642588
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45626000-45652000 Weak transcription Brain Substantia Nigra brain
2 chr15:45634600-45651600 Weak transcription Brain Hippocampus Middle brain
3 chr15:45639200-45664200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:45639600-45661800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr15:45640400-45650000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr15:45640600-45647600 Weak transcription Brain Cingulate Gyrus brain
7 chr15:45640600-45664200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr15:45640800-45664200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr15:45641000-45651600 Weak transcription Duodenum Mucosa Duodenum
10 chr15:45641200-45656400 Weak transcription Gastric stomach
11 chr15:45641400-45650000 Weak transcription Fetal Intestine Large intestine
12 chr15:45641400-45651000 Weak transcription Fetal Intestine Small intestine
13 chr15:45642000-45642600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr15:45642000-45642600 Enhancers Cortex derived primary cultured neurospheres brain
15 chr15:45642200-45642600 Weak transcription Liver Liver
16 chr15:45642400-45642600 Enhancers Brain Anterior Caudate brain

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Last update: Aug 31, 2015