Variant report

Variant rs1980288
Chromosome Location chr15:45620612-45620613
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45613600-45622000 Weak transcription Pancreas Pancrea
2 chr15:45616000-45624800 Weak transcription Gastric stomach
3 chr15:45616200-45625000 Weak transcription Fetal Intestine Large intestine
4 chr15:45616200-45625600 Weak transcription Fetal Intestine Small intestine
5 chr15:45617200-45621200 Enhancers Cortex derived primary cultured neurospheres brain
6 chr15:45617800-45621600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr15:45619200-45623000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr15:45619400-45620800 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr15:45619400-45620800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr15:45619400-45620800 Enhancers Brain Hippocampus Middle brain
11 chr15:45619400-45621200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr15:45619400-45622600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr15:45619400-45624800 Weak transcription Brain Anterior Caudate brain
14 chr15:45619600-45620800 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr15:45619600-45621200 Enhancers Brain Cingulate Gyrus brain
16 chr15:45619600-45625000 Weak transcription Brain Angular Gyrus brain
17 chr15:45619800-45623200 Weak transcription Brain Germinal Matrix brain
18 chr15:45620000-45621200 Enhancers Brain Substantia Nigra brain
19 chr15:45620400-45620800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr15:45620600-45620800 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr15:45620600-45621000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr15:45620600-45621200 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr15:45620600-45621400 Enhancers HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links